Protein Alignment cad and Cdx4

DIOPT Version :9

• Sequence 1: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Sequence 2: NP_031700.1
• Gene: Cdx4 / 12592
• MGIID: 88362
• Length: 282
• Species: Mus musculus
• Alignment Length: 259
• Identity: 95/259 - (36%)
• Similarity: 121/259 - (46%)
• Gaps: 71/259 - (27%)

  Fly   128 SGGAPGAPQLNETNSSIGVGGAGGGGG----------------VG----------GATDGGPGS- 165
            :|..||..:....:|:.|||.:||.|.                ||          |.:.|...|
Mouse    11 AGMYPGTLRSPGGSSTAGVGTSGGSGSPLPASNFTAAPVYPHYVGYPHMSNMDPHGPSLGAWSSP 75

  Fly   166 -APPNHQQHIAEGLPSPPITVSGSEISSP--GAPT-SASSPHHHLAHHLSAVANNNNNNNNNNNS 226
             :||........|.||...||..::::||  |:|. |...|              .:..:|..:.
Mouse    76 YSPPREDWSTYPGPPSTMGTVPMNDMTSPVFGSPDYSTLGP--------------TSGASNGGSL 126

  Fly   227 PSTHNNNNNNNSVSNNNRTSPSK---PPYFDWMKKPAYPAQPQPDLSSSPNLEDLSDLLDASGKT 288
            |...:.:..:.....:..||||:   .|| .||:|                      .:..:|||
Mouse   127 PDAASESLVSLDSGTSGATSPSRSRHSPY-AWMRK----------------------TVQVTGKT 168

  Fly   289 RTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKK 352
            |||:||||||||.||||||||:..:||||||||||||..|.|||||||||||||||||||..||
Mouse   169 RTKEKYRVVYTDHQRLELEKEFHCNRYITIRRKSELAVNLGLSERQVKIWFQNRRAKERKMIKK 232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cad	NP_001260641.1	Homeobox	295..347	CDD:278475	43/51 (84%)
Cdx4	NP_031700.1	Caudal_act	13..160	CDD:309740	37/161 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	13..36		8/22 (36%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	98..156		14/72 (19%)
		Homeobox	175..227	CDD:306543	43/51 (84%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	99	1.000	Domainoid score	I7058
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	136	1.000	Inparanoid score	I4534
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001802
OrthoInspector	1	1.000	-	-		otm42881
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24332
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2707
SonicParanoid	1	1.000	-	-		X14
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	11	10.950