DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cad and Barx2

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:NP_038828.2 Gene:Barx2 / 12023 MGIID:109617 Length:283 Species:Mus musculus


Alignment Length:106 Identity:32/106 - (30%)
Similarity:56/106 - (52%) Gaps:14/106 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 KKPAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKD---------KYRVVYTDFQRLELEKEYCT 312
            :.|...|:.....:.:|..|.|     ||.::.|:.         :.|.::|:.|.:.|||::..
Mouse    99 RHPVAAAEAAAAAAETPGGEAL-----ASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQK 158

  Fly   313 SRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKKG 353
            .:|::...:.:|||:|.|::.|||.|:||||.|.:|...||
Mouse   159 QKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKG 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 21/54 (39%)
Barx2NP_038828.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..141 6/38 (16%)
Homeodomain 138..194 CDD:459649 21/55 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..283 2/2 (100%)

Return to query results.
Submit another query.