Sequence 1: | NP_001260641.1 | Gene: | cad / 35341 | FlyBaseID: | FBgn0000251 | Length: | 445 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001795.2 | Gene: | CDX1 / 1044 | HGNCID: | 1805 | Length: | 265 | Species: | Homo sapiens |
Alignment Length: | 254 | Identity: | 94/254 - (37%) |
---|---|---|---|
Similarity: | 111/254 - (43%) | Gaps: | 88/254 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 132 PGAPQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNH-----QQHIAEGLPSPPITVSGSEIS 191
Fly 192 S----------PGAPTSASSPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTS 246
Fly 247 PSKPPYFDWMKKPAYP-----AQP--QPDLSSSPNLEDLSDLL-----------DASGKTRTKDK 293
Fly 294 YRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKERKQNKK 352 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
cad | NP_001260641.1 | Homeobox | 295..347 | CDD:278475 | 43/51 (84%) |
CDX1 | NP_001795.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 9..153 | 39/190 (21%) | |
Caudal_act | 13..138 | CDD:282574 | 35/175 (20%) | ||
Interaction with DNA. /evidence=ECO:0000305|PubMed:28473536 | 157..178 | 16/20 (80%) | |||
Homeobox | 158..210 | CDD:278475 | 43/51 (84%) | ||
Interaction with 5-mCpG DNA. /evidence=ECO:0000305|PubMed:28473536 | 196..207 | 10/10 (100%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 207..265 | 8/9 (89%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 98 | 1.000 | Domainoid score | I7170 |
eggNOG | 1 | 0.900 | - | - | E1_KOG0850 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 136 | 1.000 | Inparanoid score | I4560 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001802 | |
OrthoInspector | 1 | 1.000 | - | - | otm40805 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107786 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24332 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2707 |
SonicParanoid | 1 | 1.000 | - | - | X14 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.850 |