DRSC/TRiP Functional Genomics Resources

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Protein Alignment cad and ventx2.2

DIOPT Version :10

Sequence 1:NP_001260641.1 Gene:cad / 35341 FlyBaseID:FBgn0000251 Length:445 Species:Drosophila melanogaster
Sequence 2:XP_002937178.3 Gene:ventx2.2 / 100494704 XenbaseID:XB-GENE-920515 Length:333 Species:Xenopus tropicalis


Alignment Length:390 Identity:84/390 - (21%)
Similarity:135/390 - (34%) Gaps:106/390 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 AASAGEW--------HSPASSTADNFVQNVPTSAHQLMQQHHHHHAHASSSSASSGSSSSGGAPG 133
            |.|:.||        |....|..|......|:.:...........:..|..|..:||:.....||
 Frog    13 AFSSVEWLAQSSRRSHKEQPSKGDQRYSPYPSPSLPSWNSDVSPSSWNSQLSPVAGSAQVSPCPG 77

  Fly   134 APQLNETNSSIGVGGAGGGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTS 198
            :.|.:..:.|                     |...|..:.:          ....::::|..|..
 Frog    78 SAQYSSDSES---------------------SLYSNEDEDL----------FCEKDLNTPSTPGD 111

  Fly   199 ASSPHHHLAHH-----LSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKPPYFDWMKK 258
            ....|...|.|     :|..||.....:|.:.:.|.::.:.::...|..:|:|.:.|        
 Frog   112 NGLLHKDTATHDYSGMVSVPANTPRTTSNEDAAKSGYSTSTDSGYESEASRSSSTAP-------- 168

  Fly   259 PAYPAQPQPDLSSSPNLEDLSDLLDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSE 323
                 :....:|.|||     |..|..||...  :.|..:|..|...|||.:...||:....:.:
 Frog   169 -----EGDATVSLSPN-----DTSDEEGKLGR--RLRTAFTSDQISTLEKTFQKHRYLGASERRK 221

  Fly   324 LAQTLSLSERQVKIWFQNRRAKERKQNKKGSDPN--------VMGVG------VQHA------DY 368
            ||..|.|||.|:|.||||||.|.:::.:.|...:        |.|..      .|||      .|
 Frog   222 LAAKLQLSEVQIKTWFQNRRMKYKREIQDGRPDSYHPAQFFGVYGYSQQPTPVFQHAVQQPYPGY 286

  Fly   369 SQLLDAKAKLEPGLHLSHSLAHSMNPMAAMNIPAMRLHPHLAAHSHSLAAVAAHSHQLQQQHSAQ 433
            |.|::..    ||     ::.::|:|      |||....|..:....:       ..:.|||..|
 Frog   287 SPLMETL----PG-----TMPYAMHP------PAMDSRNHFNSTPFQM-------FYMPQQHLGQ 329

  Fly   434  433
             Frog   330  329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cadNP_001260641.1 Homeodomain 293..348 CDD:459649 23/54 (43%)
ventx2.2XP_002937178.3 Homeodomain 190..246 CDD:459649 23/57 (40%)

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