DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dia and Fh5

DIOPT Version :10

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:NP_200276.1 Gene:Fh5 / 835554 AraportID:AT5G54650 Length:900 Species:Arabidopsis thaliana


Alignment Length:639 Identity:165/639 - (25%)
Similarity:250/639 - (39%) Gaps:132/639 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   511 NKLPKVNIPMPPPPPG------------GGGAPPPPPPP----MPGRAGGGPPPP-PPPPMPGRA 558
            |.:....:|...||||            |...|.||.||    :..:....|||| |.|.||..|
plant   319 NSITNHGLPPLKPPPGRTASVLSGKSFSGKVEPLPPEPPKFLKVSSKKASAPPPPVPAPQMPSSA 383

  Fly   559 G--GPPPPPPPPGMGGPPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKKWD---VKNPM 618
            |  .||||.||||.|||.|||.||   |.|..|||||.:||..|..|.|  |....|   .|..:
plant   384 GPPRPPPPAPPPGSGGPKPPPPPG---PKGPRPPPPMSLGPKAPRPPSG--PADALDDDAPKTKL 443

  Fly   619 KRANWKAIVPAKMSDKAFWVKCQEDKLAQDDFLAELAVKFSSKPVKKEQKDAVDKPTTLTKKNVD 683
            |...|.. |.|.......|...:......::.:.|....:::....|..|........|.:   .
plant   444 KPFFWDK-VQANPEHSMVWNDIRSGSFQFNEEMIESLFGYAAADKNKNDKKGSSGQAALPQ---F 504

  Fly   684 LRVLDSKTAQNLAIMLGGSLKHLSYEQIKICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQEIK 748
            :::|:.|..|||:|:    |:.|:....::|....:.:.|....:|.|::..|.||     :|:|
plant   505 VQILEPKKGQNLSIL----LRALNATTEEVCDALREGNELPVEFIQTLLKMAPTPE-----EELK 560

  Fly   749 AK---GE--PLPPIEQFAATIGEIKRLSPRLHNLNFKLTYADMVQDIKPDIVAGTAACEEIRNSK 808
            .:   ||  .|...|:|...:.:|.....||..|.|..|..:.:..:|........||:|:|.|:
plant   561 LRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKESFQKLEVACKELRGSR 625

  Fly   809 KFSKILELILLLGNYMNSGSKNEAAFGFEISYLTKLSNTKDADNKQTLLHYLAD----------- 862
            .|.|:||.:|..||.||.|:....|..|::..|.||::.|..|.|.||||::..           
plant   626 LFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRTEGVRAA 690

  Fly   863 -----------------LVEKKFPDALNFY------------DDLSHVNKASRVNMDAIQKAMRQ 898
                             |||:...::...|            .:|.||.|::.::.|.:...:.:
plant   691 RTIRESQSFSSVKTEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLK 755

  Fly   899 MNSAVKNLETDLQNNKVPQCDDDK-FSEVMGKFAEECRQQVDVLGKMQLQMEKLYKDLSEYYAFD 962
            |..|:.... |..|:::....::. |.|.:..|.:.....:..:.:.:.::..|.|...:|:...
plant   756 MGHALSKAR-DFVNSEMKSSGEESGFREALEDFIQNAEGSIMSILEEEKRIMALVKSTGDYFHGK 819

  Fly   963 PSKYTMEEFFADIKTFKDAFQAAHNDNVRVREELEKKRRLQEAREQSAREQQERQQRKKAVVDMD 1027
            ..|......|..::.|...              |:|.  .:|.||  ||.:..|..||:.     
plant   820 AGKDEGLRLFVIVRDFLII--------------LDKS--CKEVRE--ARGRPVRMARKQG----- 861

  Fly  1028 APQTQEGVMDSLLEALQTGSAFGQRNRQA----RRQR--PAGAERRAQLSRSRS 1075
                            .|.||..:..||.    .||:  ||..|||...|.|.|
plant   862 ----------------STASASSETPRQTPSLDPRQKLFPAITERRVDQSSSDS 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:461886
Drf_FH3 253..453 CDD:461885
FH2 608..983 CDD:396655 90/423 (21%)
Fh5NP_200276.1 FH2 435..840 CDD:396655 89/432 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.