DRSC/TRiP Functional Genomics Resources

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Protein Alignment dia and fhdc1

DIOPT Version :9

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:XP_002933539.2 Gene:fhdc1 / 734113 XenbaseID:XB-GENE-983433 Length:1117 Species:Xenopus tropicalis


Alignment Length:597 Identity:157/597 - (26%)
Similarity:264/597 - (44%) Gaps:97/597 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   513 LPKVNIPMPPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGGPPPPP 577
            :.::.:..||||      ||.||||        ||||||||:|.:  ..|||||.|  |.|||||
 Frog    22 ITELMVEQPPPP------PPQPPPP--------PPPPPPPPLPFQ--NVPPPPPLP--GAPPPPP 68

  Fly   578 MPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKKWDVKNPMKRANWKAIVPAKMSDK-AFWVKCQ 641
            :|..:  |.|                ||...|     :|.|:...||.|...::..| ..|....
 Frog    69 LPHQV--GNG----------------HGNNSK-----RNRMRSFFWKTIPEEQVRGKNNIWTMAA 110

  Fly   642 EDKLAQDD--FLAELAVKFSSKPVKKEQKDAVDK-----PTTLTKKNVDLRVLDSKTAQNLAIML 699
            :.:..|.|  .:.||   |..   |:|.:..:.|     .::..:...::.:||||.:.|:.|.|
 Frog   111 KQQQYQIDTKTIEEL---FGQ---KEEPRSGLIKAKGNLKSSFREAKEEVSLLDSKRSMNIGIFL 169

  Fly   700 GGSLKHLSYEQI--KICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQEIKAKGEPLPPIEQFAA 762
            ....|  |.|:|  .|...||  |:.....||:|::..|..|.:|:|:....:...|...:.|..
 Frog   170 KQFKK--STEEIIGDIREGRC--DLYGPEPLQELLKLSPESEEIKKLKAFSGEVAKLSLADTFMY 230

  Fly   763 TIGEIKRLSPRLHNLNFKLTYADMVQDIKPDIVAGTAACEEIRNSKKFSKILELILLLGNYMNSG 827
            .:.::...|.|:..:..:..:......:|.|:.....|.:|:.:.::...||.|:|..||.||:|
 Frog   231 LLIQVPNYSLRIEAMVLRKEFGSCHSALKNDMTVIRVATKELMSCEQLHSILFLVLQAGNIMNAG 295

  Fly   828 SKNEAAFGFEISYLTKLSNTKDADNKQTLLHYLADLVEKKFPDALNFYDDLSHVNKASRVNMDAI 892
            .....|.||::|.|.:|::||.......|||::|...:||....|.|.:.|..|.:|:|:::|.:
 Frog   296 GYAGNAVGFKLSSLLRLADTKANKPGMNLLHFVALEAQKKDVSLLTFSEKLPSVGEAARLSIDNM 360

  Fly   893 QKAMRQMNSAVKNLETDLQNNKVPQCDDDKFSEVMGKFAEECRQQVDVLGKMQLQMEKLYKDLSE 957
            :...:.:::..|:::..::  |.|:     ..:.|..|.::..:.:..|..::.:::|....|.:
 Frog   361 EAEFKSLSTKTKSIKDQIK--KEPE-----LYKQMEDFLKDAVKDLKDLESLRAEIKKECHTLID 418

  Fly   958 YYAFDPSKYTMEEFFADIKTFKDAFQAAHNDNVRVRE-----------ELEKKRRLQEAREQS-- 1009
            ::..|.....::|.|...:.|.|.|..|..:| |.||           |||:|||...|.|.:  
 Frog   419 FFCEDKETMKLDECFQIFRDFCDKFNKAVKEN-REREIQDLRKQKKLNELEQKRRSWVASENANF 482

  Fly  1010 AREQQERQQRKKAVVDMDAPQTQEGVMDSLLEALQTGSAFGQRNRQARRQR---PAGAERRAQLS 1071
            .|...|.        |::. .|:.|:.|.|.:..|:..   .||...||.|   ...|:|..|:.
 Frog   483 GRSSSEN--------DVEI-LTKAGLEDFLQQRPQSSL---NRNSSTRRSRLSLGVAADRELQMY 535

  Fly  1072 RSRSRTRVTNGQ 1083
            ...|:...|..:
 Frog   536 LGASQVEETTSK 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:283920
Drf_FH3 253..453 CDD:283917
FH2 608..983 CDD:280362 89/384 (23%)
fhdc1XP_002933539.2 FH2 82..444 CDD:396655 89/383 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204639at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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