DRSC/TRiP Functional Genomics Resources

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Protein Alignment dia and grid2ipa

DIOPT Version :10

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:XP_009297619.1 Gene:grid2ipa / 561017 ZFINID:ZDB-GENE-091113-42 Length:1804 Species:Danio rerio


Alignment Length:557 Identity:140/557 - (25%)
Similarity:254/557 - (45%) Gaps:78/557 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   459 EKAKAKESKRSEEYEKKIEQLES----AKQEAEAKAAHLEEKVKLMEANGVAAPSPNKLPKVNIP 519
            ::.:.::..:..|.:::::|||.    .:|:.:.:.|..:::::..:.:    .|..::|.|...
Zfish  1278 QQRQQQQQLQQLEQQQQLQQLEQQQQLQQQQIQQQQAQQQQQIQQQQQH----RSTPQIPSVAQA 1338

  Fly   520 MPPPPP------------GGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPPGMGG 572
            ...|.|            ....|.....||:      .|.|....|..|.:..||||||      
Zfish  1339 RQSPQPMYHEHRHHHHHRSHHEAQSQMQPPI------SPQPQTHNPTEGSSVEPPPPPP------ 1391

  Fly   573 PPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKKWDVKNPMKRANWKAIVPAKMSDKAFW 637
            .|||.:|                    |.||.| .|:|.......:||..|:.:   :.|:...|
Zfish  1392 LPPPCVP--------------------PPLPKG-SPQKSDSSHMSVKRLRWEQV---ENSEGTIW 1432

  Fly   638 VKCQE----DKLAQDDFLAELAVKFSSK--PVKKEQKDAVDKPT----TLTKKNVDLRVLDSKTA 692
            .:.:|    |||:......:|.:.|.::  ||      |:.:|:    |..||:| :.:|..|.|
Zfish  1433 GQMEEDSDYDKLSDMVKYLDLELHFGTQKTPV------ALPEPSPQVETFKKKDV-VEILSHKKA 1490

  Fly   693 QNLAIMLGGSLKHLSYEQIKICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQEIKAKGEPLPPI 757
            .|.:|:: ..|| ||..:::..|:...::.|....::||:.|.|..:.:::.::.:.....|...
Zfish  1491 YNASILI-AHLK-LSPGELRQVLMTMSSERLEPPHIKQLLLYAPDDDEVRQYEQYRNDPGKLSEP 1553

  Fly   758 EQFAATIGEIKRLSPRLHNLNFKLTYADMVQDIKPDIVAGTAACEEIRNSKKFSKILELILLLGN 822
            :||...:..:.....||.:|:||.|..:..::::........|..|::||||.:||||.:|.:||
Zfish  1554 DQFVLQMLSVPEYKTRLKSLHFKTTLQEKTEEMRGAYDCVFKASLELKNSKKLAKILEFVLAMGN 1618

  Fly   823 YMNSGS-KNEAAFGFEISYLTKLSNTKDADNKQTLLHYLADLVEKKFPDALNFYDDLSHVNKASR 886
            |:|:|. |.....||:|::||:||.||..|.|.|.||.|...:.:.||:.|:|..:|..|.:|::
Zfish  1619 YLNNGQPKTGKTTGFKINFLTELSTTKTVDGKSTFLHILVKSLCQHFPEVLDFGKELVMVPQAAK 1683

  Fly   887 VNMDAIQKAMRQMNSAVKNLETDLQNNKVPQCDDDKFSEVMGKFAEECRQQVDVLGKMQLQMEKL 951
            ||...|......:::.::::....|  |:|...:|:|:.||..|.|.....|..|..:|.:..:.
Zfish  1684 VNQRNITSDFNDLHATIQDIRVACQ--KMPATAEDRFAVVMSGFLENSHPAVQSLESLQQRAMEE 1746

  Fly   952 YKDLSEYYAFDPSKYTMEEFFADIKTFKDAFQAAHND 988
            :..::.|:..|....|.|.||.....|...|:...:|
Zfish  1747 FCKVASYFGEDGKTTTTENFFGIFAEFIAKFERTLSD 1783

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:461886
Drf_FH3 253..453 CDD:461885
FH2 608..983 CDD:396655 106/385 (28%)
grid2ipaXP_009297619.1 PDZ1_L-delphilin-like 49..124 CDD:467225
PDZ_canonical 131..202 CDD:483948
HN_L-delphilin-R1_like 230..309 CDD:259820
PDZ2_L-delphilin-like 385..459 CDD:467226
HN_L-delphilin-R2_like 498..577 CDD:259821
FH2 1406..1778 CDD:396655 106/385 (28%)
Blue background indicates that the domain is not in the aligned region.

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