DRSC/TRiP Functional Genomics Resources

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Protein Alignment dia and Fhdc1

DIOPT Version :10

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:NP_001099907.1 Gene:Fhdc1 / 295161 RGDID:1311955 Length:1148 Species:Rattus norvegicus


Alignment Length:642 Identity:158/642 - (24%)
Similarity:262/642 - (40%) Gaps:127/642 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 GVAAPSPNKLPKVNIPMPPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPP 568
            |..:||.:         |.|||     |||||||.|....|.||.||||..|...||||.|||||
  Rat    27 GQTSPSAS---------PAPPP-----PPPPPPPCPHSGEGFPPSPPPPLPPPLPGGPPVPPPPP 77

  Fly   569 GMGGPPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKKWDVKNPMKRANWKAIVPAKMSD 633
            |:  ||...:.|....|                       |||     .|:...||.|...::..
  Rat    78 GL--PPASYLNGYSSLG-----------------------KKK-----RMRSFFWKTIPEEQVRG 112

  Fly   634 KA-FWV-------------KCQEDKLAQDDFLAELAVKFSSKPVKKEQKDAVDKPTTLTKKNVDL 684
            |. .|.             |..|:...|.:..::.::......:....:||.:          ::
  Rat   113 KTNIWTLAAKQQHHYQIDKKTIEELFGQQEDTSKASLPKRGGALNSSFRDARE----------EI 167

  Fly   685 RVLDSKTAQNLAIMLGGSLKHLSYEQIKICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQEIKA 749
            .|||:|.:.|:.|.|....|  |.:.|...:.:..::...|..|:::::.||..|.:|:|:....
  Rat   168 AVLDAKRSMNIGIFLKQFKK--SPQSIVEDIHQGRSEHYGSETLREILKLLPESEEVKKLKTFNG 230

  Fly   750 KGEPLPPIEQFAATIGEIKRLSPRLHNLNFKLTYADMVQDIKPDIVAGTAACEEIRNSKKFSKIL 814
            ....|...:.|...:.::...|.|:..:..|..:......:..||....||.:|:...::...||
  Rat   231 DVSKLSLADSFLYCLIQVPNYSLRIEAMVLKKEFLPFCTSLYKDITTLRAAMKELMLCEELHSIL 295

  Fly   815 ELILLLGNYMNSGSKNEAAFGFEISYLTKLSNTKDADNKQTLLHYLADLVEKKFPDALNFYDDLS 879
            .|:|..||.||:|.....|.||::|.|.||::||.......|||::|...:|.....|||.:.|.
  Rat   296 HLVLQAGNIMNAGGYAGNAVGFKLSSLLKLADTKANKPGMNLLHFVAQEAQKHNTILLNFSEKLQ 360

  Fly   880 HVNKASRVNMDAIQKAMRQMNSAVKNLETDLQNNKVPQCDDDKFSEVMGKFAEECRQQVDVLGKM 944
            .|.:.||:::|.|:..:..:....|:|..::|.::..:...:.|.:    ||.|...::: |.|.
  Rat   361 QVQETSRLSLDIIEAELHSLFVRTKSLRENIQRDQELRQQMEDFLQ----FAVEKLAELE-LWKR 420

  Fly   945 QLQMEKLYKDLSEYYAFDPSKYTMEEFFADIKTFKDAFQAAHNDNVRVREELEKK--RRLQEARE 1007
            :||:|.  ..|.:::..|.....::|.|...:.|...|..|..|| ..|||.|:|  :||:|..:
  Rat   421 ELQVEA--HTLIDFFCEDKETMKLDECFQIFRDFCTRFNKAVKDN-HDREEQERKQLQRLKELEQ 482

  Fly  1008 --------------QSAREQQERQQRKKAVVDMDA-------------PQTQEGVMD-------S 1038
                          :|:.|...:...||...|:.:             |.|:...:.       .
  Rat   483 KRHSWTTGELGGFGRSSSENDVQMLAKKGTEDLPSFLKPRPNSPSYRPPNTRRSRLSLGISADRE 547

  Fly  1039 LLEALQTGSA-------FGQRNRQARRQRPAGAERRAQLSRSRSRTRVTNGQLMTRE 1088
            ||..|::.::       |....|.:.||      .|..::....|.:.|:|.:.|.:
  Rat   548 LLTFLESATSSPEDPNKFNSLPRSSPRQ------TRPTIAWMEPREQETHGPVFTHD 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:461886
Drf_FH3 253..453 CDD:461885
FH2 608..983 CDD:396655 90/388 (23%)
Fhdc1NP_001099907.1 FH2 93..457 CDD:396655 90/387 (23%)
PTZ00449 <559..760 CDD:185628 9/46 (20%)
PHA03307 733..>1128 CDD:223039
Blue background indicates that the domain is not in the aligned region.

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