DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dia and Fhdc1

DIOPT Version :9

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:NP_001099907.1 Gene:Fhdc1 / 295161 RGDID:1311955 Length:1148 Species:Rattus norvegicus


Alignment Length:642 Identity:158/642 - (24%)
Similarity:262/642 - (40%) Gaps:127/642 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 GVAAPSPNKLPKVNIPMPPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGRAGGPPPPPPPP 568
            |..:||.:         |.|||     |||||||.|....|.||.||||..|...||||.|||||
  Rat    27 GQTSPSAS---------PAPPP-----PPPPPPPCPHSGEGFPPSPPPPLPPPLPGGPPVPPPPP 77

  Fly   569 GMGGPPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKKWDVKNPMKRANWKAIVPAKMSD 633
            |:  ||...:.|....|                       |||     .|:...||.|...::..
  Rat    78 GL--PPASYLNGYSSLG-----------------------KKK-----RMRSFFWKTIPEEQVRG 112

  Fly   634 KA-FWV-------------KCQEDKLAQDDFLAELAVKFSSKPVKKEQKDAVDKPTTLTKKNVDL 684
            |. .|.             |..|:...|.:..::.::......:....:||.:          ::
  Rat   113 KTNIWTLAAKQQHHYQIDKKTIEELFGQQEDTSKASLPKRGGALNSSFRDARE----------EI 167

  Fly   685 RVLDSKTAQNLAIMLGGSLKHLSYEQIKICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQEIKA 749
            .|||:|.:.|:.|.|....|  |.:.|...:.:..::...|..|:::::.||..|.:|:|:....
  Rat   168 AVLDAKRSMNIGIFLKQFKK--SPQSIVEDIHQGRSEHYGSETLREILKLLPESEEVKKLKTFNG 230

  Fly   750 KGEPLPPIEQFAATIGEIKRLSPRLHNLNFKLTYADMVQDIKPDIVAGTAACEEIRNSKKFSKIL 814
            ....|...:.|...:.::...|.|:..:..|..:......:..||....||.:|:...::...||
  Rat   231 DVSKLSLADSFLYCLIQVPNYSLRIEAMVLKKEFLPFCTSLYKDITTLRAAMKELMLCEELHSIL 295

  Fly   815 ELILLLGNYMNSGSKNEAAFGFEISYLTKLSNTKDADNKQTLLHYLADLVEKKFPDALNFYDDLS 879
            .|:|..||.||:|.....|.||::|.|.||::||.......|||::|...:|.....|||.:.|.
  Rat   296 HLVLQAGNIMNAGGYAGNAVGFKLSSLLKLADTKANKPGMNLLHFVAQEAQKHNTILLNFSEKLQ 360

  Fly   880 HVNKASRVNMDAIQKAMRQMNSAVKNLETDLQNNKVPQCDDDKFSEVMGKFAEECRQQVDVLGKM 944
            .|.:.||:::|.|:..:..:....|:|..::|.::..:...:.|.:    ||.|...::: |.|.
  Rat   361 QVQETSRLSLDIIEAELHSLFVRTKSLRENIQRDQELRQQMEDFLQ----FAVEKLAELE-LWKR 420

  Fly   945 QLQMEKLYKDLSEYYAFDPSKYTMEEFFADIKTFKDAFQAAHNDNVRVREELEKK--RRLQEARE 1007
            :||:|.  ..|.:::..|.....::|.|...:.|...|..|..|| ..|||.|:|  :||:|..:
  Rat   421 ELQVEA--HTLIDFFCEDKETMKLDECFQIFRDFCTRFNKAVKDN-HDREEQERKQLQRLKELEQ 482

  Fly  1008 --------------QSAREQQERQQRKKAVVDMDA-------------PQTQEGVMD-------S 1038
                          :|:.|...:...||...|:.:             |.|:...:.       .
  Rat   483 KRHSWTTGELGGFGRSSSENDVQMLAKKGTEDLPSFLKPRPNSPSYRPPNTRRSRLSLGISADRE 547

  Fly  1039 LLEALQTGSA-------FGQRNRQARRQRPAGAERRAQLSRSRSRTRVTNGQLMTRE 1088
            ||..|::.::       |....|.:.||      .|..::....|.:.|:|.:.|.:
  Rat   548 LLTFLESATSSPEDPNKFNSLPRSSPRQ------TRPTIAWMEPREQETHGPVFTHD 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:283920
Drf_FH3 253..453 CDD:283917
FH2 608..983 CDD:280362 90/388 (23%)
Fhdc1NP_001099907.1 FH2 93..457 CDD:396655 90/387 (23%)
PTZ00449 <559..760 CDD:185628 9/46 (20%)
PHA03307 733..>1128 CDD:223039
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1204639at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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