DRSC/TRiP Functional Genomics Resources

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Protein Alignment dia and Grid2ip

DIOPT Version :10

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:XP_006248928.1 Gene:Grid2ip / 288484 RGDID:1310492 Length:1203 Species:Rattus norvegicus


Alignment Length:611 Identity:165/611 - (27%)
Similarity:261/611 - (42%) Gaps:120/611 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 FLSILQHLL----YIRDDFYFRPAYYQLIEECISQIVFHKGYCDPNFENRNFNIDTSLLLDDIVE 459
            ||.:|...|    .|.||| ..|                    :.::|..:|:.|....:.:  |
  Rat   674 FLDVLSEQLGPRVTIVDDF-LTP--------------------ENDYEEMSFHDDQGSFVTN--E 715

  Fly   460 KAKAKESKRSEEYEKKIEQLESAKQEAEAKAAHLEEKVKLMEANGVAAPSPNKLPKVNIPMPPPP 524
            ::.|.|...|.|        |.:.....:.:.|:                            |||
  Rat   716 RSSASECVSSSE--------EGSSLTYSSISDHI----------------------------PPP 744

  Fly   525 PGGGGAPPPPPPPMP-------GRAGGGPPPPP---PPPMPGRAGGPPPPPPPPGMGGPPPPPMP 579
            |    ..||||||:|       .|...||..||   ..|:. :...|.||||||    |.|||: 
  Rat   745 P----LSPPPPPPLPFHDPKPSSRTSDGPRGPPQSLTKPLT-QISHPVPPPPPP----PLPPPV- 799

  Fly   580 GMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKKWDVKNPMKRANWKAIVPAKMSDKAFWVKCQE-- 642
                    |..|||        :..|:..::.......:||..|:.:   :.|:...|.:..|  
  Rat   800 --------PCAPPM--------ISRGVGHRRSETSHMSVKRLRWEQV---ENSEGTIWGQLGEDS 845

  Fly   643 --DKLAQDDFLAELAVKF-SSKPVKKEQKDAVDKPTTLTKKNVDLRVLDSKTAQNLAIMLGGSLK 704
              |||:......:|.:.| :.||.|     .|..|....||.| :.:|..|.|.|.:|:| ..||
  Rat   846 DYDKLSDMVKYLDLELHFGTQKPPK-----PVPGPEPFRKKEV-VEILSHKKAYNTSILL-AHLK 903

  Fly   705 HLSYEQIKICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQEIKAKGEPLPPIEQFAATIGEIKR 769
             |:..:::..|:..:...|....|.||:.:.|..:..:|.|..:.....|...:||...:..:..
  Rat   904 -LTPGELRQVLMSMEPRRLEPAHLAQLLLFAPDADEEQRYQAFREAPGRLSEPDQFVLQMLSVPE 967

  Fly   770 LSPRLHNLNFKLTYADMVQDIKPDIVAGTAACEEIRNSKKFSKILELILLLGNYMNSGS-KNEAA 833
            ...||.:|:|:.|..:..::|:..:.....|..|::||:|.:||||.:|.:|||:|.|. |....
  Rat   968 YKTRLRSLHFQATLQEKTEEIRGSLECLRQASLELKNSRKLAKILEFVLAMGNYLNDGQPKTNKT 1032

  Fly   834 FGFEISYLTKLSNTKDADNKQTLLHYLADLVEKKFPDALNFYDDLSHVNKASRVNMDAIQKAMRQ 898
            .||:|::||:|::||..|.|.|.||.||..:.:.||:.|.|..||..|..|::||..|:...:..
  Rat  1033 TGFKINFLTELNSTKTVDGKSTFLHILAKSLSQHFPELLGFAQDLPTVPLAAKVNQRALTVDLAD 1097

  Fly   899 MNSAVKNLETDLQNNKVPQCDDDKFSEVMGKFAEECRQQVDVLGKMQLQ-MEKLYKDLSEYYAFD 962
            ::..|..::...| :.||. .:|:|:.||..|.|..:..:..|..:|.: ||:|.|.|: ::..|
  Rat  1098 LHDTVSEIQVACQ-SMVPS-SEDRFAVVMTSFLETAQPALRALDGLQREAMEELGKALA-FFGED 1159

  Fly   963 PSKYTMEEFFADIKTFKDAFQAAHND 988
            ....|.|.||.....|...|:.|.:|
  Rat  1160 SKATTSEAFFGIFSEFMSKFERALSD 1185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:461886
Drf_FH3 253..453 CDD:461885 12/57 (21%)
FH2 608..983 CDD:396655 110/381 (29%)
Grid2ipXP_006248928.1 PDZ1_L-delphilin-like 2..77 CDD:467225
HN_L-delphilin-R1_like 122..201 CDD:259820
PDZ2_L-delphilin-like 269..342 CDD:467226
HN_L-delphilin-R2_like 378..457 CDD:259821
FH2 812..1180 CDD:396655 110/381 (29%)
Blue background indicates that the domain is not in the aligned region.

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