DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dia and cdc12

DIOPT Version :9

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:NP_592869.1 Gene:cdc12 / 2541603 PomBaseID:SPAC1F5.04c Length:1841 Species:Schizosaccharomyces pombe


Alignment Length:1201 Identity:245/1201 - (20%)
Similarity:428/1201 - (35%) Gaps:358/1201 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 QYIQQLSVA--ELDAKF-LEIIEDM-------------NIPKDKREPLL--AKSKEERQKMIMWH 110
            ::|.||.||  ||:..| |:|::.:             |.|..:.|..|  .:|:|||       
pombe   487 EFINQLIVACEELEQGFDLDILDSLRESGIHEVIQLLRNFPDQQLEKQLNIYESEEER------- 544

  Fly   111 LKGKNSLERSANSRFEKPIDYVEYLQN--------GEHSTHKVYQCVES------LRVALTSNPI 161
                    |:.:....:.:|  .::.|        .|.::::|.:.:||      |........:
pombe   545 --------RTISQTTHEDVD--SFMSNESSILSSFNEFASNEVGRLLESTIQNILLAKGTEKQKV 599

  Fly   162 SWIKEFGVAGIGTIEKLLARSK-NNASYEKIEFEAIRCLKAIMNNTWGLNVVLNPDQHSVVLLLA 225
            ..||.|.    ..::::|..|| :|.|:|.       .|:|.:|       :|....:|......
pombe   600 KLIKVFN----SLLQRILLNSKVSNESFED-------SLQASLN-------MLTERFYSDDTARN 646

  Fly   226 QSLDPRKPQTMCEALKLLASFCIVYERN--------GYEKVLRAIT-------TIAATSFKASER 275
            ...:.:..:.|.|.:        |.||:        |.|.::..:.       .:..:..:.:|.
pombe   647 ALKEAKASRAMAEKM--------VIERDAMAAQVNLGAEDLIAKLNKEVEDQKDVILSQKRTNET 703

  Fly   276 FRPIVDALFASDQQDPKRDLACHSLIFINTLTNTPTDLNFRLHLRCEIMRMGLYDRLDEFTKIVE 340
            .:..:|||..|.....:|.                         ..|:..:.|....|.|    :
pombe   704 LKTEIDALQKSHVTQIQRS-------------------------EVELRELYLLINSDSF----Q 739

  Fly   341 ASNN--ENLQQHFKIFNEIREDDFEEFVQRFDNVTFNMDDATDCFDVLKNLVTDTTSEPYFLSIL 403
            .|.|  |.:.::.....::|:.:...     ::..::.|...|....|:..::..:|:|   |.:
pombe   740 GSTNSKERIIEYLLDKLDLRKKEIAA-----ESTLWSNDGIDDKLRDLREQMSRQSSQP---STV 796

  Fly   404 QHLLYIRDDFYFRP------------AYYQLIEECISQIVFHKGYCD-PNFENRNFNIDTSLLLD 455
            ..:|.|.|..:.||            |...|..|....|...||..| .|.|.....|::::::.
pombe   797 STILQIPDKKFHRPFPRHLHRYVGRSASESLTSEKDESIKSMKGIDDFANLEIPGKGIESNVVIK 861

  Fly   456 DIVEKAKAKESKRSEEYEKKIEQLESAKQEAEAKAAHLEEKVKLMEANGVAAPSPNKLPKVNIPM 520
            ||               ..:..::.|.:.:||..:.:  .|:...:....|...|..:..     
pombe   862 DI---------------SNQTHEINSVENKAETVSNN--SKITNFDIPNDATSLPTIITH----- 904

  Fly   521 PPPPPGGGGAPPPPPPPMPGRAGGGPPPPPPPPMPGR---------------------AGGPPPP 564
                                     |.||||||:|.:                     ||..|..
pombe   905 -------------------------PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAF 944

  Fly   565 PPPPGMGGPPPPPMPGMMRPGGGPPPPPMMMGPMVPVLPH---GL--KPKKKWDVKNPMKRANWK 624
            ||||    |||||   ::...||....|.:...:.....|   ||  :|.::      :|:.:|:
pombe   945 PPPP----PPPPP---LVSAAGGKFVSPAVSNNISKDDLHKTTGLTRRPTRR------LKQMHWE 996

  Fly   625 AIVPAKMS---DKAFWVKCQE------DKLAQDDFLAELAVKFSSKPVKKEQKDAVDKPTTLTKK 680
                 |::   :..||....:      :.|.....|.||...|:.|..|           ||.||
pombe   997 -----KLNSGLEFTFWTGPSDEANKILETLHTSGVLDELDESFAMKEAK-----------TLVKK 1045

  Fly   681 NVDLRVLDSKTAQNLAIMLGGSLKHLSYEQIKICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQ 745
            ........|...|.|..:....|.|.:..:|...:|.||      :.:.:.:::|...:.|.: .
pombe  1046 TCARTDYMSSELQKLFGIHFHKLSHKNPNEIIRMILHCD------DSMNECVEFLSSDKVLNQ-P 1103

  Fly   746 EIKAKGEP----------LPPIEQFAATIGEIKRLSPRL---------HNLN-------FKLTYA 784
            ::||..||          |...|:.|:.:.....|..||         ..:|       .:..|.
pombe  1104 KLKADLEPYRIDWANGGDLVNSEKDASELSRWDYLYVRLIVDLGGYWNQRMNALKVKNIIETNYE 1168

  Fly   785 DMVQDIKPDIVAGTAACEEIRNSKKFSKILELILLLGNYMNSGSKNEAAFGFEISYLTKLSNTKD 849
            ::|:..|   :.|.||. |:|:||.|..:|.|||.||||||...:.  |.||.|..|.:|...|:
pombe  1169 NLVRQTK---LIGRAAL-ELRDSKVFKGLLYLILYLGNYMNDYVRQ--AKGFAIGSLQRLPLIKN 1227

  Fly   850 ADNKQTLLHYLADLVEKKFPDALNFYDDLSHVNKASRVNMDAIQKAMRQMNSAVKNLETDLQNNK 914
            |:|.::|||.|...:.|.||...||..:||.|.:|:::|::||::...::....:||:.|     
pombe  1228 ANNTKSLLHILDITIRKHFPQFDNFSPELSTVTEAAKLNIEAIEQECSELIRGCQNLQID----- 1287

  Fly   915 VPQCD------------DDKFSEVMGKFAEECRQQVDVLGKMQLQMEKLYKDLSEYYAFDPSKYT 967
               ||            |||...|:..:..|..:::|.|.:....|.....:...|:...|:...
pombe  1288 ---CDSGALSDPTVFHPDDKILSVILPWLMEGTKKMDFLKEHLRTMNTTLNNAMRYFGEQPNDPN 1349

  Fly   968 MEE-FFADIKTFKDAFQAAHNDNVRVREELEKKRRLQEAREQSAREQQERQQRKKAVVDMDAPQT 1031
            .:. ||..:.:|...:..|.:||::..||...:.|.............||...:...:|.:|   
pombe  1350 SKNLFFKRVDSFIIDYSKARSDNLKSEEEEASQHRRLNLVNNHKEHVLERAMSENNKMDNEA--- 1411

  Fly  1032 QEGVMDSLLEALQTGSAFGQRNRQA---------------------------------------- 1056
            .:|.:|. |..::..|....|||.|                                        
pombe  1412 MDGFLDK-LRNVKLESHHKPRNRSAITMGKEHLIEAPNTSTKSSPAKNELFVPKRSSVKSDLAKV 1475

  Fly  1057 RRQRPAGAERRAQLSRSRSRTRVTNGQLMTR 1087
            |.:.|.|:|....||.:.:.|....|::.::
pombe  1476 RPRYPKGSESTDGLSDALNITPTKKGEVSSK 1506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:283920 42/214 (20%)
Drf_FH3 253..453 CDD:283917 37/229 (16%)
FH2 608..983 CDD:280362 103/422 (24%)
cdc12NP_592869.1 Drf_GBD 234..408 CDD:283920
Drf_FH3 441..638 CDD:283917 39/185 (21%)
FH2 981..1427 CDD:214697 118/492 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 79 1.000 Domainoid score I2351
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000085
OrthoInspector 1 1.000 - - otm47407
orthoMCL 1 0.900 - - OOG6_101727
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3069
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.930

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