DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dia and Grid2ip

DIOPT Version :9

Sequence 1:NP_001246113.1 Gene:dia / 35340 FlyBaseID:FBgn0011202 Length:1098 Species:Drosophila melanogaster
Sequence 2:NP_001152793.1 Gene:Grid2ip / 170935 MGIID:2176213 Length:1203 Species:Mus musculus


Alignment Length:486 Identity:145/486 - (29%)
Similarity:228/486 - (46%) Gaps:58/486 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   520 MPPPPPGGGGAPPPPPPPMP-------GRAGGGPPPPP---PPPMPGRAGGPPPPPPPPGMGGPP 574
            :||||     ..||||||:|       .|...||..||   ..|:. :...|.||||||    |.
Mouse   741 IPPPP-----LSPPPPPPLPFHDPKPSSRTSDGPRGPPQSLTKPLT-QINHPVPPPPPP----PL 795

  Fly   575 PPPMPGMMRPGGGPPPPPMMMGPMVPVLPHGLKPKKKWDVKNPMKRANWKAIVPAKMSDKAFWVK 639
            |||:         |..|||        |..|:..::.......:||..|:.:   :.|:...|.:
Mouse   796 PPPV---------PCAPPM--------LSRGVGHRRSETSHMSVKRLRWEQV---ENSEGTIWGQ 840

  Fly   640 CQE----DKLAQDDFLAELAVKF-SSKPVKKEQKDAVDKPTTLTKKNVDLRVLDSKTAQNLAIML 699
            ..|    |||:......:|.:.| :.||.|     .|..|....||.| :.:|..|.|.|.:|:|
Mouse   841 LGEDSDYDKLSDMVKYLDLELHFGTQKPPK-----PVPGPEPFRKKEV-VEILSHKKAYNTSILL 899

  Fly   700 GGSLKHLSYEQIKICLLRCDTDILSSNILQQLIQYLPPPEHLKRLQEIKAKGEPLPPIEQFAATI 764
             ..|| |:..:::..|:..:...|....|.||:.:.|..:..:|.|..:.....|...:||...:
Mouse   900 -AHLK-LTPGELRQVLMSMEPRRLEPAHLAQLLLFAPDADEEQRYQAFREAPGRLSEPDQFVLQM 962

  Fly   765 GEIKRLSPRLHNLNFKLTYADMVQDIKPDIVAGTAACEEIRNSKKFSKILELILLLGNYMNSGS- 828
            ..:.....||.:|:|:.|..:..::|:..:.....|..|::||:|.:||||.:|.:|||:|.|. 
Mouse   963 LSVPEYKTRLRSLHFQATLQEKTEEIRGSLECLRQASLELKNSRKLAKILEFVLAMGNYLNDGQP 1027

  Fly   829 KNEAAFGFEISYLTKLSNTKDADNKQTLLHYLADLVEKKFPDALNFYDDLSHVNKASRVNMDAIQ 893
            |.....||:|::||:|::||..|.|.|.||.||..:.:.||:.|.|..||..|..|::||..|:.
Mouse  1028 KTNKTTGFKINFLTELNSTKTVDGKSTFLHILAKSLSQHFPELLGFAQDLPTVPLAAKVNQRALT 1092

  Fly   894 KAMRQMNSAVKNLETDLQNNKVPQCDDDKFSEVMGKFAEECRQQVDVLGKMQLQ-MEKLYKDLSE 957
            ..:..::..|..::...|:  :....:|:|:.||..|.|..:..:..|..:|.: ||:|.|.|: 
Mouse  1093 GDLADLHDTVSEIQVACQS--MAPSSEDRFAVVMASFLETAQPALRALDGLQREAMEELGKALA- 1154

  Fly   958 YYAFDPSKYTMEEFFADIKTFKDAFQAAHND 988
            ::..|....|.|.||.....|...|:.|.:|
Mouse  1155 FFGEDSKATTSEAFFGIFSEFMSKFERALSD 1185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
diaNP_001246113.1 Drf_GBD 66..248 CDD:283920
Drf_FH3 253..453 CDD:283917
FH2 608..983 CDD:280362 108/381 (28%)
Grid2ipNP_001152793.1 PDZ_signaling 9..69 CDD:238492
HN_L-delphilin-R1_like 122..201 CDD:259820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..270
PDZ_signaling 269..342 CDD:238492
HN_L-delphilin-R2_like 378..457 CDD:259821
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..541
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..586
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..656
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..821 34/106 (32%)
FH2 812..1180 CDD:280362 108/381 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3069
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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