DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rhau and AT1G48650

DIOPT Version :10

Sequence 1:NP_610056.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_001154411.1 Gene:AT1G48650 / 841287 AraportID:AT1G48650 Length:1206 Species:Arabidopsis thaliana


Alignment Length:1006 Identity:332/1006 - (33%)
Similarity:518/1006 - (51%) Gaps:132/1006 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QRDRD--SSGSNARKGNRPPG-----------LRGKDIGLYYRNLARQQKKDRGENAESKEPQIR 53
            :.|||  ||.|....|:....           ||.|:    .:.:..:::|||.:.........|
plant   113 ESDRDVGSSQSQQMAGSTLDNIDQWRFKLTMLLRNKE----DQEVVSRERKDRRDFDHISALATR 173

  Fly    54 LGCNVSAPSGVLERVKELMEDYSRAPSRQNVDDK--------------NVDA---KFQQQFRHLL 101
            :|.:....|.::...|..:.:|     |.::|||              .|||   .|..|.:.|:
plant   174 MGLHSRQYSKIVVISKAPLPNY-----RPDLDDKRPQREVVLPFGLQSEVDAHLHSFLDQKKTLI 233

  Fly   102 ----SVNFEEFVA------ETKERNADLDWVNPKLDER------LQLELGQRQLEEN--AKKRLE 148
                ..|..|.:|      ||.|....    |....||      |||:..|:|..::  .:|.:.
plant   234 PEMPRQNSSESLANGYGNYETPETVMQ----NSLARERILRPRSLQLKSKQQQWVDSPEGQKMVG 294

  Fly   149 ARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRI 213
            .||.||..|..|.:::|:..|||:::.|.||||||||:||.:|:..|.....::|.|||||||||
plant   295 FRKTLPAYKEKDALLKAIAANQVVVVSGETGCGKTTQLPQYILESEIEAARGATCSIICTQPRRI 359

  Fly   214 SAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLILD 278
            |||:::|.|:.||.|.:|.||||::|||..:.|: ..:.:|||||||::|..|..:..::.:::|
plant   360 SAISVSERVAAERGEQIGESVGYKVRLEGMRGRD-TRLLFCTTGVLLRRLLVDRSLKGVTHVVVD 423

  Fly   279 EIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLE 343
            |||||.:..|.|:.:||.:||.|||||:||||||:..:.|..||...|...|.|..:||:..:||
plant   424 EIHERGMNEDFLLIVLKDLLPRRPDLKLILMSATLNAELFSSYFGGAPAMHIPGFTYPVRAHFLE 488

  Fly   344 DVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNS------------YDSRVLDKLR 396
            |.|..:.|....:.......:....:|:.:|..:.....|.::            |:.|..|.|.
plant   489 DYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRKSLISSAVEDALEAADFKGYNFRTRDSLS 553

  Fly   397 L--PESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYN------ILDKPKTSKGQRW 453
            .  |:|.|   .:.|.:::.:|.:.|..||:|||:.|:|.|:.|.|      :|..|        
plant   554 CWSPDSIG---FNLIENVLCHIVKGERPGAVLVFMTGWDDINSLKNQLEAHSLLGDP-------- 607

  Fly   454 RDHMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIE 518
             :.:.:...|..|.|.||:.:|.|||.|.||::::|.:||||:||:||||||:.|:.|.|:||..
plant   608 -NKVLLLACHGSMASSEQRLIFDRPPEGIRKIVLATNMAETSITINDVVYVIDCGKAKETSYDAL 671

  Fly   519 TNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKL 583
            .|...|...|::||..:|||||||||.||.||:|:.|...:...|...||:||:.|:|:.|.:|.
plant   672 NNTPCLLPSWISKAAARQRRGRAGRVMPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIKS 736

  Fly   584 LHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSA 648
            |.:.....||...:..|...:::..||.||.|.|||....|||||.:|:.||::|::|||:::.|
plant   737 LGLGSISEFLSRALQPPEALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGA 801

  Fly   649 LFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAE 713
            :|.||||:.:..|.||.:.||..|..|:...:..:.:.:....||||.:......::|:..:|:.
plant   802 IFNCLDPVMTVVAGLSVRDPFLMPFDKKDLAETARSKFSGRDYSDHLTLVRAYNGWKDAERTHSG 866

  Fly   714 RDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLAS-SNCKDAASNKNSEKIPLLRAIIGAGLYP 777
            .|:|:||||||.||:.::.|:.||..||.....:.: ..|     :|.|....|:||||.||::|
plant   867 YDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLIDNIEGC-----SKLSHDEHLVRAIICAGMFP 926

  Fly   778 NMAHLRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLDST 842
            .:.      .:.|:.::|.....:|| :|..:.||||.........:.|:..:.|...:||.|||
plant   927 GVC------SVVNKEKSITLKTMEDG-QVLLYSSSVNGNVPMIPFPWLVFNDKVKVNSVFLRDST 984

  Fly   843 MVFPMALIIFGDGVEAG-----VTQNTPYL------CVAKTYYFKCNRETADVVIQLRSNLEKLL 896
            .|....|::|||.:.:|     :.....||      .:|.||            :.|:..|::|:
plant   985 AVSDSVLLLFGDKISSGGFDGHLKMLGGYLEFFMKPTLAYTY------------LSLKRELDELI 1037

  Fly   897 LKKALYPAPIEENGYEKQLIKAIELLLSLDE 927
            ..|.:.| .::...|:| |:.||.||:|.|:
plant  1038 QNKLVNP-KLDIQLYDK-LMTAIRLLVSEDQ 1066

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhauNP_610056.1 HrpA 160..>664 CDD:441249 205/523 (39%)
OB_NTP_bind 767..856 CDD:400182 28/88 (32%)
AT1G48650NP_001154411.1 HrpA 299..>822 CDD:441249 210/535 (39%)
OB_NTP_bind 916..998 CDD:400182 28/88 (32%)
DSRM_SF 1106..1160 CDD:380679
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.