Protein Alignment Rhau and NIH

DIOPT Version :10

• Sequence 1: NP_610056.1
• Gene: Rhau / 35339
• FlyBaseID: FBgn0032883
• Length: 942
• Species: Drosophila melanogaster
• Sequence 2: NP_172152.1
• Gene: NIH / 837177
• AraportID: AT1G06670
• Length: 1576
• Species: Arabidopsis thaliana
• Alignment Length: 1006
• Identity: 311/1006 - (30%)
• Similarity: 482/1006 - (47%)
• Gaps: 203/1006 - (20%)

  Fly     6 DSSGSNAR----KGNRPPGLRGKDIGLYYRNLARQQKKDRGENAESKEPQIRLGCNVSAPSGVLE 66
            :.||...|    ||:   |:...|....|.  ||.||:..|:.......:.|.........|:.:
plant    64 NGSGEERRLSLFKGD---GISKSDKRRMYE--ARNQKEKEGDGISKSYSKHRYETRFQKAGGIRK 123

  Fly    67 ---------------RVKELMED-YSRAP---------SRQNVDDKNVDAKFQQQF---RHLLSV 103
                           ..|.::.| ::|.|         |.......||::.::..|   .|:...
plant   124 TRISPKKLKCVSFPPEAKAVLHDLFTRYPPCDGDTTGTSLGIYTTGNVNSNWKDDFFKKPHMTKH 188

  Fly   104 NFEEFVAETKERNADLDWVNPKLDERLQLELGQRQLEENAKKRLEARKKLPTMKYADDIIQAVRE 168
            :.|..|.              .|..||:.|...|::       .|||.|||...:.|.||.||..
plant   189 DIENNVV--------------SLSSRLKKERHFREI-------FEARSKLPIASFRDAIISAVES 232

  Fly   169 NQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNS 233
            |||:||.|.|||||||||||.|||. :......:|:||||||||||||::::.:|:||.|::|.:
plant   233 NQVVLIAGETGCGKTTQVPQYLLDH-MWHSKKEACKIICTQPRRISAISVSDRISWERGETIGRT 296

  Fly   234 VGYQIRLESRKARERASITYCTTGVLLQQL------QSDPLMHNLSVLILDEIHERSVETDLLMG 292
            |||::||:|...|| :|:.:||.|:||:.|      .|.|   :::.:|:||||||...:|.::.
plant   297 VGYKVRLQSEGGRE-SSVVFCTNGILLRVLIGKGVNSSVP---DITHIIVDEIHERDSYSDFMLM 357

  Fly   293 LLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKFR 357
            :|:.:||..|.|::||||||:..:.|.:||..||:.|:.|..:||:..:|:|.||..|.:.....
plant   358 ILRDLLPSNPHLRLILMSATLDAERFSEYFGGCPVVRVPGFTYPVRTFFLDDALSVLNSDKNSHL 422

  Fly   358 DRRPKRD-PPERRM--------------------------KHEA--------------------- 374
            ....||| ..|.::                          .|||
plant   423 LSAVKRDFKDEDKVSLDEAIDLAWTNDEFDCLVDLVSSEGSHEAYNYQNSTTGLTPLMVFAGKGR 487

  Fly   375 --------------------------------------MIEPYLRRIR-NSYDSR-VLDKLRL-- 397
                                                  :|..:...|: ||..:: :|||...
plant   488 VSDVCKLLSVGADCTLKSKEGITALELAEKENQFETAQIIREHAGNIQSNSQQAQDLLDKYMATI 552

  Fly   398 -PESEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQL-YNILDKPKTSKGQRWRDHMAVF 460
             ||.   .|:..|..|:..||.:..:|||||||||:::||:. ..:||       .|:..|.|.|
plant   553 KPEE---VDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLD-------DRFFAHSAKF 607

  Fly   461 ---PLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQ 522
               .|||.:.:.||:.||.|||.|.||::::|.|||::||||||||||:|||.|..:||...::.
plant   608 IILCLHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVS 672

  Fly   523 SLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLL--- 584
            :|...||:|||.:||.|||||.:.||||:|:|:.|...:.:...||::|..::.:.|.:|:|
plant   673 TLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKMLDPN 737

  Fly   585 -HIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSA 648
             :::|   |||.|::.|..::|:..:.:||.|.||.....||.||....:||:.|::.|||..:.
plant   738 CNVND---FLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAI 799

  Fly   649 LFCCLDPITSAAAALSFKSPFYSPL--GKESRVDEIKRRMAR--NMRSDHLMVHNTIIAYRDSRY 709
            |..||||....|.|...|.||..||  |...:....|..:|.  ...||||........:::::.
plant   800 LVNCLDPALILACAADEKDPFTMPLSPGDRKKAAAAKHELASLYGDHSDHLATVAAFQCWKNAKA 864

  Fly   710 SHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFL--ASSNCKDAASNKNSEKIPLLRAIIG 772
            |...::||.|.|:|.:.:::|:.:..:....|..:..:  :||||     :.|:....:|||:|.
plant   865 SGQAKEFCSKYFISQVVMKRLDDLCRKLQGELNRHGVIPSSSSNC-----SLNAHDPGILRAVIA 924

  Fly   773 AGLYPNMAHLRKSRQIKNRVRA-IHTMATDDGRRVNFHPS---SVNSGESGFDSAYFVYFQRQKS 833
            .||||.:.  |.....|||.|: |.|:|   |.:|.. ||   :|:...:.||.|..|:.:..:.
plant   925 VGLYPMLG--RMCPLSKNRTRSVIETIA---GAKVRV-PSLSNNVDMSSTKFDEALIVFDEITRG 983

  Fly   834 TDLFLLDSTMVFP-MALIIFGDGVEAGVTQN 863
            ....::.|..|.| :.:::|...:....|::
plant   984 DWGVVIRSCTVLPTIPVLLFSREIAVSTTES 1014

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rhau	NP_610056.1	HrpA	160..>664	CDD:441249	219/608 (36%)
		OB_NTP_bind	767..856	CDD:400182	29/93 (31%)
NIH	NP_172152.1	R3H_DEXH_helicase	18..76	CDD:100077	3/11 (27%)
		HrpA	217..>820	CDD:441249	222/620 (36%)
		ANKYR	<468..575	CDD:440430	14/109 (13%)
		ANK repeat	475..505	CDD:293786	0/29 (0%)
		ANK repeat	507..533	CDD:293786	1/25 (4%)
		OB_NTP_bind	919..1007	CDD:400182	29/93 (31%)