DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rhau and AT4G16680

DIOPT Version :10

Sequence 1:NP_610056.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_001329688.1 Gene:AT4G16680 / 827370 AraportID:AT4G16680 Length:796 Species:Arabidopsis thaliana


Alignment Length:807 Identity:245/807 - (30%)
Similarity:400/807 - (49%) Gaps:139/807 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 SGVLERVKELMEDYSRAPSRQNVDDKNVDAKFQQQFRHLLSVNFEEFVAETKERNADLDWVNPKL 126
            ||.:...:|..||:....:|     ....||.::|.     |:..|||         .|.:...:
plant    60 SGRVVTEQEAWEDHQAQKAR-----VRFGAKDKKQV-----VDGYEFV---------FDDLTGFV 105

  Fly   127 DERLQLELGQRQ---LEENAKKRLEARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQ 188
            :|..:.|.|:.:   .:..|:|..|.|:.||...|.:::::.:.||||::|||.||.|||||:||
plant   106 EESSEAETGKHRGCYSKTAAEKAREGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQ 170

  Fly   189 ILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITY 253
            .|.:    .|.....:|.||||||::|:::|..|:.|....||:.|||.||.|...: |:..|.|
plant   171 YLQE----AGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTS-EKTVIKY 230

  Fly   254 CTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDF 318
            .|.|:||::|..:|.:.:.||:|:||.|||::.||:|..|:|.:...||||::|:.|||:..:.|
plant   231 MTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKF 295

  Fly   319 CDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRI 383
            .:||::..::.|.|..:||:.|            |:|                            
plant   296 SEYFDSARIYLIPGRRYPVEKL------------FRK---------------------------- 320

  Fly   384 RNSYDSRVLDKLRLPESEGCEDIDFIADL---VYYICENEPEGAILVFLPGYDKISQLYNILDKP 445
                               |.:.|::..:   |..|.:.|..|.|||||.|.::|..:...|.:.
plant   321 -------------------CPEPDYLETVIRTVVQIHQTEAIGDILVFLTGQEEIETVETNLKRR 366

  Fly   446 KTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRT 510
            ....|.:..: :.:.|::|.:.:..|..||...|.|.|||:::|.|||||:|||.|.|||:.|..
plant   367 MMDLGTKGSE-IIICPIYSNLPTPLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYC 430

  Fly   511 KATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDI-PT--PEILRS 572
            |..:|:..|.::||....::||:..||.||:||..||.|:.|::      :.|: ||  |||.|:
plant   431 KINSYNPRTGMESLLVTPISKASAAQRAGRSGRTGPGKCFRLYN------IKDLEPTTIPEIQRA 489

  Fly   573 KLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPID 637
            .|.|::|:||.|.|.|.:.|  ..::.|...|:...:|||..:.|||:.|.:|.:|..:.:.|:|
plant   490 NLASVVLTLKSLGIQDVFNF--DFMDPPPENALLKALELLYALGALDEIGEITKVGERMVEFPVD 552

  Fly   638 PQMGKMILMSALFCCLDPITSAAAALSF-KSPFYSPLGKESRVDEIKRRM-----ARNMRSDHLM 696
            |.:.|||:.|..:.|...|.:.||.||. .|.||.|  |..:|...|.||     ..|: .||:.
plant   553 PMLSKMIVGSEKYKCSKEIITIAAMLSVGNSVFYRP--KNQQVFADKARMDFYEDTENV-GDHIA 614

  Fly   697 VHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNS 761
            :.....::::..||   ..:|.:.|:.|.::::...:::|...||.......:||..|..:.|  
plant   615 LLRVYNSWKEENYS---TQWCCEKFIQSKSMKRARDIRDQLLGLLNKIGVELTSNPNDLDAIK-- 674

  Fly   762 EKIPLLRAIIGAGLYPNMAHLRKS---RQIKNRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSA 823
                  :||: ||.:|:.|.|:|:   |::|            :.:.|..||:|...|.|  .|.
plant   675 ------KAIL-AGFFPHSAKLQKNGSYRRVK------------EPQTVYVHPNSGLFGAS--PSK 718

  Fly   824 YFVYFQRQKSTDLFLLDSTMVFPMALI 850
            :.||.:...:|..::..:|.:.|..||
plant   719 WLVYHELVLTTKEYMRHTTEMKPEWLI 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhauNP_610056.1 HrpA 160..>664 CDD:441249 171/509 (34%)
OB_NTP_bind 767..856 CDD:400182 24/87 (28%)
AT4G16680NP_001329688.1 HrpA 135..>750 CDD:441249 224/713 (31%)

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