DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rhau and bgcn

DIOPT Version :9

Sequence 1:NP_001260639.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_523832.2 Gene:bgcn / 47873 FlyBaseID:FBgn0004581 Length:1215 Species:Drosophila melanogaster


Alignment Length:911 Identity:199/911 - (21%)
Similarity:365/911 - (40%) Gaps:234/911 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 ADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVS 223
            :|:|:|::..::||:...:....|:..:|.::|||.  |...|:.:|:|.:.:.|.|...::..:
  Fly   154 SDEILQSLYASRVIVYNAALCWDKSVFLPLVILDDC--RNKKSNVKIMCIERQAILATYNSQRTA 216

  Fly   224 YERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETD 288
            ....|.||.:||.|:...| .......|.|.|....|:.|.|.. ..|:|.|:::::|.....||
  Fly   217 NFFGEQLGETVGIQLPYFS-AVSSSTFIIYSTAQYFLRSLTSQQ-FRNISHLVVNDVHLHDPYTD 279

  Fly   289 LLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNY-- 351
            :|:..:::.|....:|:|:|:|.....:.|.|:|.       ||:.  :.|:...:|..:.:|  
  Fly   280 ILLSEIRMALSSHQNLRVVLLSQMGNPKKFTDFFG-------EGLQ--LNMIKQPEVAPRVSYLN 335

  Fly   352 -------------------EF-QKFRDRRPKRDPPER------RMKHEAMIEPYLRRIRNSYD-- 388
                               |. :.||...|:.:..::      .:..:|.:.|:|..:  :||  
  Fly   336 ELHSCIALAGIHKGPDIYKEIPEAFRANNPRNEQMDKCLQAYGELGTDAALRPFLYAV--NYDLA 398

  Fly   389 ----------------SRVLDK---LRLPESEGCE------------------------------ 404
                            :..|:|   |||....|.:                              
  Fly   399 PVNYRHSLTGKTAVHFASELNKANHLRLLLFMGADPYIVDLFQQNAISLAAMNGNHECIDVLNSY 463

  Fly   405 ---------------DIDFIADLVYYICENEPE--------GAILVFLPGYDKISQL-YNILDKP 445
                           |.|.|.|:: |:...:||        |.||:.||.|..|.:| |.||...
  Fly   464 SLHGYVVKSAKPDFVDYDLIIDIM-YLLRTKPEYSPGEYSPGNILIILPTYYHIVKLNYMILSHC 527

  Fly   446 KTSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQR--KVIISTIIAETSVTIDDVVYVINSG 508
            .|...|    ..::|.|:..|::...||:..   |...  ||:::|.|.|:........|.|::.
  Fly   528 LTGSLQ----ECSIFLLYDNMRNDYLQALVN---ASDETVKVVLATDIIESLCLKVPFKYQIDTA 585

  Fly   509 RTKATNYDIETNIQSLDE--VWVTKANTQQR----RGRAGRVRPGICYNLFSRAREDRMDDIPTP 567
            ......||  |...|.|:  .||.|....:|    :...|.|:   |:.|.|:...:.:.:...|
  Fly   586 CRLNNVYD--TTSCSGDDRFEWVAKDALLRRELILQPNKGDVQ---CFRLISKEAYEELSETSQP 645

  Fly   568 EILRSKLESIILSLKLLHIDDP----YRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLG 628
            .:...:|:.|.|::|||   .|    ..:|...|:.|....:...|:.||:|:.||....:|.||
  Fly   646 SLQTMQLDKICLAVKLL---SPNTIISEYLGITISPPPLINVHHAVQFLKKIDVLDDAEDVTWLG 707

  Fly   629 MHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEI----------- 682
            ..|..:|:..|:|:|::...|..|||||.:..::||...|...|..::  :|.:           
  Fly   708 CRLMDIPVSCQLGRMLIFGILLRCLDPILTIVSSLSTADPLGIPFTED--IDNLWDRFTIYIQNS 770

  Fly   683 --KRR--MARNMRSDHLM-----------VHN-TIIAYRDSRYSHAERDFCYKNFLSSMTLQQLE 731
              |.|  ::.|..|||.:           :|| |...|....|          .|:.:..::||.
  Fly   771 IKKERTYLSDNQFSDHFIFVRLYKEWQNRMHNRTPPLYLKDEY----------EFMLNGLMEQLT 825

  Fly   732 RMKNQF------SELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNM--AHLRKSRQI 788
            .::::.      :.|:::...|:.:|....:.|.:     :::|.:..|:|||:  ...|||   
  Fly   826 SIRSEIVSSLRAANLIHSRGKLSMNNLNQMSCNWH-----MVKAALTGGMYPNIYAVDTRKS--- 882

  Fly   789 KNRVRAIHTMATDDGRRVNFHPSSV--------NSGESGFDSAYFVYFQRQKSTDLFLLDSTMVF 845
                    ::.:.....|:.||::|        |.....|.:.:.| ..||||   .::.:|:|.
  Fly   883 --------SLKSAFSGNVSMHPNTVLRDFLEPLNISAQSFRTPWIV-CNRQKS---HIVYATLVV 935

  Fly   846 PMALIIFGD----------GVEAGVTQNTPYLCVAKTYYFKCNRETADVVIQLRSNLEKL---LL 897
            |:|:.:|..          ..|..:|.....:.:.:..:...::.||::|::.|....|:   ||
  Fly   936 PLAVAMFSGHPRIRLSPICDSEMSLTDRNVNVFIDEWIWMVMSKATAEMVMRTRYYFFKMYHDLL 1000

  Fly   898 K 898
            |
  Fly  1001 K 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhauNP_001260639.1 DEXDc 147..328 CDD:214692 44/168 (26%)
DEXDc 170..312 CDD:238005 38/141 (27%)
Helicase_C 411..544 CDD:278689 40/149 (27%)
HA2 614..696 CDD:214852 28/96 (29%)
OB_NTP_bind 735..853 CDD:285018 27/133 (20%)
bgcnNP_523832.2 ANK repeat 406..438 CDD:293786 6/31 (19%)
ANK 407..>460 CDD:238125 6/52 (12%)
Ank_2 413..>460 CDD:289560 6/46 (13%)
HrpA <484..973 CDD:224557 124/536 (23%)
HA2 694..763 CDD:214852 22/70 (31%)
OB_NTP_bind 823..945 CDD:285018 30/141 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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