Protein Alignment Rhau and pea

DIOPT Version :10

• Sequence 1: NP_610056.1
• Gene: Rhau / 35339
• FlyBaseID: FBgn0032883
• Length: 942
• Species: Drosophila melanogaster
• Sequence 2: NP_610928.1
• Gene: pea / 36561
• FlyBaseID: FBgn0086895
• Length: 1242
• Species: Drosophila melanogaster
• Alignment Length: 843
• Identity: 260/843 - (30%)
• Similarity: 410/843 - (48%)
• Gaps: 120/843 - (14%)

  Fly    18 PPGLRGKDIGLYYRNLARQQKKDRGENAESKEPQIRLGCNVSAPSGVLERVKELMEDYSRAPSRQ 82
            ||.|.|....|:..:..|..|...|..|::...|..|. .......:|:|.:|:    ...|:..
  Fly   467 PPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQSALS-KERREQKMLQREQEI----EAMPTSL 526

  Fly    83 NVDDKN-VDAKFQQQFRHLLSVNFEEFVAETKERNADLDWVNPKLDERLQLELGQRQLEENAKKR 146
            |   || :|...:.:.|. |:.|.....|           ..|::.|..:..:|.::.....|..
  Fly   527 N---KNWIDPLPEDESRS-LAANMRGMAA-----------APPEVPEWKKHVIGGKKSSFGKKTD 576

  Fly   147 L---EARKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCR--II 206
            |   |.|:.||..|..||:|:||.:||:::::|.||.|||||:.|.|.:      |..:.|  |.
  Fly   577 LTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGETGSGKTTQITQYLGE------CGFTARGKIG 635

  Fly   207 CTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHN 271
            ||||||::|:::|:.|:.|....||..|||.||.|...:.| ..|.|.|.|:||::...:..:.:
  Fly   636 CTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRFEDCTSPE-TIIKYMTDGMLLRECLMEAELKS 699

  Fly   272 LSVLILDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFP 336
            .||::|||.|||::.||:|.||||..:..||:||:|:.|||:....|..||...|:|.|.|..||
  Fly   700 YSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYFFKAPIFTIPGRTFP 764

  Fly   337 VKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYLRRIRNSYDSRVLDKLRLPESE 401
            |::||.::                |:.|              ||
  Fly   765 VEVLYTKE----------------PETD--------------YL--------------------- 778

  Fly   402 GCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLM 466
               |...|.  |..|...||.|.||:||.|.::|.....||.:...|.|....: :.:.|::|.:
  Fly   779 ---DASLIT--VMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPE-LIILPVYSAL 837

  Fly   467 QSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTK 531
            .|..|..:|...|||.|||:|:|.|||||:|||.:.||::.|..|...|:.:|.:.||....:::
  Fly   838 PSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQ 902

  Fly   532 ANTQQRRGRAGRVRPGICYNLFS-RAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQT 595
            |..:||.|||||..||..|.|:: ||..|.|...|.|||.|:.|.:.:|.||.:.|:|...|  .
  Fly   903 AAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHF--D 965

  Fly   596 LINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAA 660
            .::||..|::.|.:|.|..:.|||..|.||.||..:|:.|::|.:.||::||....|.|.|.:..
  Fly   966 FMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIV 1030

  Fly   661 AALSFKSPFYSPLGKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSM 725
            :.||.::.||.|..|::..|: |:........|||.:.....:::::::|:|   :||:||:...
  Fly  1031 SMLSVQNVFYRPKDKQALADQ-KKAKFNQAEGDHLTLLAVYNSWKNNKFSNA---WCYENFVQIR 1091

  Fly   726 TLQQLERMKNQFSELLYNYKFLASSNCKDAAS-NKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIK 789
            ||::.:.::.|...::..:|.       |..| .|||.:|   :..|.:|.:.|.|.       |
  Fly  1092 TLKRSQDVRKQLLGIMDRHKL-------DVVSAGKNSVRI---QKAICSGFFRNAAK-------K 1139

  Fly   790 NRVRAIHTMATDDGRRVNFHPSSVNSGESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALIIF 852
            :......|:.  |.:.|..||||.....   ...:.:|.:..::|..::.:.|.:.|..|:.|
  Fly  1140 DPQEGYRTLV--DSQVVYIHPSSALFNR---QPEWVIYHELVQTTKEYMREVTTIDPKWLVEF 1197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rhau	NP_610056.1	HrpA	160..>664	CDD:441249	182/506 (36%)
		OB_NTP_bind	767..856	CDD:400182	18/86 (21%)
pea	NP_610928.1	GH2-like_DHX8	7..74	CDD:409668
		S1_DHX8_helicase	285..363	CDD:240189
		HrpA	578..>1203	CDD:441249	232/712 (33%)