DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rhau and CG8915

DIOPT Version :10

Sequence 1:NP_610056.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_573208.1 Gene:CG8915 / 32715 FlyBaseID:FBgn0030833 Length:976 Species:Drosophila melanogaster


Alignment Length:949 Identity:258/949 - (27%)
Similarity:435/949 - (45%) Gaps:149/949 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NARKGNRPPGLRGKDIGLYYRNLARQQKKDRGENAESKEPQIRLGCNVSAPSGVLERVKELMEDY 75
            |.|....|.|     .|.......:..|.|.|:..:|::.::               :::|::|:
  Fly    32 NGRVTGGPKG-----TGKQKTRPGKNAKADAGDKLKSEDEKM---------------LRQLVDDF 76

  Fly    76 --SRAPSRQ-----NVDDKNVDAKFQQQFRHLLSVNFEE----FVAETKER--------NADLDW 121
              |..|.:|     .....:|....|.:....:|...||    |::..:..        |..||.
  Fly    77 LQSCEPEKQLPGLTKAQRSHVHRLAQHRGLKTVSKGPEENRVLFISRPQSDGQQQYILCNTKLDI 141

  Fly   122 VNPKLD---------ERLQLE-----------------------LGQRQL---EENAKKRLE-AR 150
            ..|.||         ||..:.                       :|||.:   :.|..:.:: .|
  Fly   142 CPPLLDVLGQMAGNVERRLMNSVGDLKCNKQQYKDIRLPSNFGLVGQRLIPPPQSNRNRNIQHER 206

  Fly   151 KKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISA 215
            :.||..|..:.|:..::.:||::|.|:||.||:||:||.:|:.|...  .:..||:.:|||||:|
  Fly   207 RSLPIYKQRESILNVLQRDQVLIIKGATGSGKSTQLPQYILEWAAEH--RAPVRIVVSQPRRIAA 269

  Fly   216 IAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCTTGVLLQQLQSD--PLMHNLSVLILD 278
            |:::|.:|.||.|:.|.:|||.||: :|:......:...|:|.||:.|..|  ....|.:.||:|
  Fly   270 ISVSERISKERGEAPGTTVGYNIRM-NRQCSSNTVLMLTTSGCLLRALAMDKKSFFKNTTHLIID 333

  Fly   279 EIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLE 343
            |.|||.::||.|:...|:.|...|.|:::|||||:..:...:||....:..:||..|.|.:.:||
  Fly   334 EAHERDLDTDFLLLATKLELQKNPHLRLVLMSATMDLEALSNYFGGGTVMDVEGRSFEVSIYHLE 398

  Fly   344 DVLSKTNY---EFQKFRDRRPKRDPPERRMK----HEAMIEPYLRRIRNSYDSRVLDKLRLPESE 401
            |:||||.|   ..:||..:...::.|...:.    ...::.|.:                     
  Fly   399 DILSKTGYMHPRMEKFLGKPTGKETPSELLAAYYGGNTIVHPDI--------------------- 442

  Fly   402 GCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLM 466
               |.|.|..|:..:......||::|:||||..::.|...|:....      |:.:.:..|||.:
  Fly   443 ---DNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESSLP------REQITIILLHSQV 498

  Fly   467 QSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTK 531
            .:.||:.|||..|..:.|:|:||.|.:||:||.|::|||::|..|...||...:...|...|:::
  Fly   499 DNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQ 563

  Fly   532 ANTQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPY-RFLQT 595
            |:.:||.||||||..|.||.|:...|..||:....|||:|..|:.|.|..||...|... .||..
  Fly   564 ADAKQRAGRAGRVCHGNCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLTKLAAPDKKIENFLAL 628

  Fly   596 LINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAA 660
            .::.|..:|:......||.:..||:...:||||..:|:||:..|:||.::.|....|||.:...|
  Fly   629 ALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSIYLRCLDSMIIIA 693

  Fly   661 AALSFKSPFYSPL--GKESRVDEIKRRMARNMRSDHLMVHNTIIAYRDSRYSHAER----DFCYK 719
            |..|.:.||...:  ||:|.....:...|.:..||.|.|   |..|.:  :::.:|    |||.:
  Fly   694 AYHSVRDPFVLNIERGKKSGQQISRVLFAGDGMSDSLAV---IKLYEE--FTNLKRKDIGDFCER 753

  Fly   720 NFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAASNKNSEKIPLLRAIIGAGLYPNMAHLRK 784
            ||:....::......:...:.:|.....:.::.:.|:|..|...  ::|..:.|||||.:|::  
  Fly   754 NFICRNAMEMFVSAASTLRDTVYRIFRFSEASARLASSFNNDTN--MIRLALTAGLYPKLAYM-- 814

  Fly   785 SRQIKNRVRAIHTMATDDGRRVNFHPSSVNSG---ESGFDSAYFVYFQRQKSTDLF--LLDSTMV 844
            .|:.||:      :..:....|....||...|   :....|.:.::.::.::.|..  |..:|:|
  Fly   815 DRENKNQ------LVAEGDPLVQVSRSSCLRGKKKQKDLASEWILFVEKTRTADQISSLEHTTLV 873

  Fly   845 FPMALIIFGDGVEAGVTQ---NTPYLCVAKTYYFKCNRE 880
              ..|::...|.:..:|:   :...||:......||..|
  Fly   874 --SGLMVALAGGKRFITEAHGSEMLLCLDSWIRLKCPAE 910

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhauNP_610056.1 HrpA 160..>664 CDD:441249 172/513 (34%)
OB_NTP_bind 767..856 CDD:400182 20/93 (22%)
CG8915NP_573208.1 R3H 67..123 CDD:460206 11/70 (16%)
HrpA 208..>702 CDD:441249 176/526 (33%)
OB_NTP_bind 799..884 CDD:400182 21/94 (22%)

Return to query results.
Submit another query.