DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rhau and Dhx33

DIOPT Version :10

Sequence 1:NP_610056.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster
Sequence 2:NP_848144.3 Gene:Dhx33 / 216877 MGIID:2445102 Length:698 Species:Mus musculus


Alignment Length:708 Identity:213/708 - (30%)
Similarity:331/708 - (46%) Gaps:127/708 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 GQRQ----LEENAKKRLEA----RKKLPTMKYADDIIQAVRENQVILIVGSTGCGKTTQVPQILL 191
            |:||    .:.:|....||    |:.||..:....::..:|.....:::|.||.|||||:||.|.
Mouse    39 GRRQTPPLAQPSASPYREALELQRRSLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLY 103

  Fly   192 DDAISR-GCASSCRIICTQPRRISAIAIAEWVSYERCESLGNSVGYQIRLESRKARERASITYCT 255
            :..||| |.     |..|||||::||::|..||.|:...||..|||.:|.|. ...|...|.:.|
Mouse   104 EGGISRQGI-----IAVTQPRRVAAISLATRVSDEKRTELGKLVGYTVRFED-VTSEDTRIKFLT 162

  Fly   256 TGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHRPD-----LKVILMSATVRE 315
            .|:||::..||.|:...|.:||||.|||::.||:|.|::|.....|.:     ||||:||||:..
Mouse   163 DGMLLREAISDSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDV 227

  Fly   316 QDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRPKRDPPERRMKHEAMIEPYL 380
            ..|..|||..|:..:||...|:::.|.:.                     |::...|.|::.   
Mouse   228 DLFSQYFNRAPVLYLEGRQHPIQIFYTKQ---------------------PQQDYLHAALVS--- 268

  Fly   381 RRIRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPEGA-ILVFLPGYDKISQLYNILDK 444
                                            |:.|.:..|... |||||.|.::|..:      
Mouse   269 --------------------------------VFQIHQEAPASQDILVFLTGQEEIEAM------ 295

  Fly   445 PKTSKGQRWRD----------HMAVFPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTID 499
            .||.     ||          .|.|.||::.:...:|..||:..|.|.|||||||.|||||:||.
Mouse   296 SKTC-----RDIARHLPDGCPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITIT 355

  Fly   500 DVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDRMDDI 564
            .:.||:::|..||..|:.::.::.|....|:|....||.|||||...||||.|::....::.:.:
Mouse   356 GIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKM 420

  Fly   565 PTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGV---ELLKRIEALDQTGTLTP 626
            ..|||.|..|.|:||.|..:.:.:...|  ..::.|:|:.|:..:   :||..:|..|...||||
Mouse   421 TVPEIQRCNLASVILQLLAMKVPNVLTF--DFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTP 483

  Fly   627 LGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNMR 691
            :|..:|..|::|:..|.||:|:.|.|.:.|.:..:.||..|..|:|..:...|..::::.. :..
Mouse   484 IGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFI-SSE 547

  Fly   692 SDHLMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMKNQFSELLYNYKFLASSNCKDAA 756
            .||:.:.|   .||..:.....:|:|.:||::|..:..:..::.|..|:.........|:..|..
Mouse   548 GDHITLLN---IYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDME 609

  Fly   757 SNKNSEKIPLLRAIIGAGLYPNMAHLRKSRQIKNRVRAIHTMATDDGRR-VNFHPSSV 813
            |         :|..:...|:.|.|.|:..          .|.||.|..: |..|||||
Mouse   610 S---------VRRCMAHSLFMNTAELQTD----------GTYATTDTHQPVAIHPSSV 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhauNP_610056.1 HrpA 160..>664 CDD:441249 168/523 (32%)
OB_NTP_bind 767..856 CDD:400182 15/48 (31%)
Dhx33NP_848144.3 Required for nucleolar location. /evidence=ECO:0000250|UniProtKB:Q9H6R0 1..71 9/31 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 29..50 3/10 (30%)
HrpA 64..>534 CDD:441249 175/544 (32%)
DEAH box 185..188 2/2 (100%)
HA2, required for interaction with EIF3G and RPL26. /evidence=ECO:0000250|UniProtKB:Q9H6R0 462..553 27/91 (30%)
Critical for rDNA-binding 536..550 1/14 (7%)
OB_NTP_bind 611..688 CDD:400182 15/48 (31%)
Blue background indicates that the domain is not in the aligned region.

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