Protein Alignment Ns4 and der

DIOPT Version :10

• Sequence 1: NP_610055.1
• Gene: Ns4 / 35338
• FlyBaseID: FBgn0032882
• Length: 575
• Species: Drosophila melanogaster
• Sequence 2: NP_417006.2
• Gene: der / 946983
• ECOCYCID: G7319
• Length: 490
• Species: Escherichia coli
• Alignment Length: 320
• Identity: 69/320 - (21%)
• Similarity: 120/320 - (37%)
• Gaps: 87/320 - (27%)

  Fly   171 LEFSDILLIIVDVRYATLMFPPSLYDYIINTLKKHAIVVFNKVDLVEPHAVVAWRQYFRDRYPQL 235
            :|.:|::|.:||.| |.||.........:.:.:|...:|.||.|.::|...
E. coli    79 IEEADVVLFMVDAR-AGLMPADEAIAKHLRSREKPTFLVANKTDGLDPDQA-------------- 128

  Fly   236 PVVLFASFLPRSRKGSQRGPQAHRRSMEGVYNIYKECQRYVQG-----EVDLTTWEQKI--REDM 293
             ||.|.|.                    |:..||.....:.:|     |..|..|.:.:  :|::
E. coli   129 -VVDFYSL--------------------GLGEIYPIAASHGRGVLSLLEHVLLPWMEDLAPQEEV 172

  Fly   294 RSDQLDILDEISTAVEGELKISSSIDTTPHEHVKYHSGVLTIGCIGFPNVGKSSLINALKGRKVV 358
            ..| .:...:......||.:.....|.        .|..:.:..:|.||||||:|.|.:.|.:.|
E. coli   173 DED-AEYWAQFEAEENGEEEEEDDFDP--------QSLPIKLAIVGRPNVGKSTLTNRILGEERV 228

  Fly   359 SVSRTPGHTKHFQTIFLTPLVR------LCDCPGL---------VFPSSTPKSLQVLLGSFPISQ 408
            .|...||.|:  .:|:: |:.|      |.|..|:         |...|..|:||.:..: .:..
E. coli   229 VVYDMPGTTR--DSIYI-PMERDGREYVLIDTAGVRKRGKITDAVEKFSVIKTLQAIEDA-NVVM 289

  Fly   409 LAVPYR------SLKFLGEHLNLPQLLRLHLPEDYDEWSAVA------ISDAWAYKRGFL 456
            |.:..|      .|..||..||..:.|.:.:    ::|..::      :.:...::.||:
E. coli   290 LVIDAREGISDQDLSLLGFILNSGRSLVIVV----NKWDGLSQEVKEQVKETLDFRLGFI 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ns4	NP_610055.1	HSR1_MMR1	163..390	CDD:206750	54/240 (23%)
		RbgA	204..474	CDD:440775	60/287 (21%)
der	NP_417006.2	PRK00093	3..462	CDD:234628	69/320 (22%)