DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns4 and Gnl2

DIOPT Version :10

Sequence 1:NP_610055.1 Gene:Ns4 / 35338 FlyBaseID:FBgn0032882 Length:575 Species:Drosophila melanogaster
Sequence 2:NP_663527.2 Gene:Gnl2 / 230737 MGIID:2385207 Length:728 Species:Mus musculus


Alignment Length:643 Identity:140/643 - (21%)
Similarity:239/643 - (37%) Gaps:205/643 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 QKRNTKGPPKYLRSTQESYEDSDVPETTRKLMEQPFARGGNRNKNVNRYNLQFYQEGKKELEQMK 85
            ::||::|  |.::..|  |:.:....|..::  :|..:.....:.:.:.:||.:||   |::::.
Mouse    48 ERRNSRG--KVIKPLQ--YQSTVASGTVARV--EPNIKWFGNTRVIKQASLQKFQE---EMDKVM 103

  Fly    86 QEGFK--------PF----EKLSPAQREV---DDRYFAGCDFP----VRPPWTLTE--------- 122
            ::.:|        |.    :::.|...:|   |...|.....|    .||....::         
Mouse   104 KDPYKVVMKQSKLPMSLLHDRIQPHNAKVHILDTESFESTFGPKSQRKRPNLFASDMQSLLENAE 168

  Fly   123 -SKEELDRTENRYF--------KEYVDELQKKQRAGDSKELSLFELNLETWRQLWRVLEFSDILL 178
             |.|..|:.::|..        .|..:|:.||   |.||.:         |.:|::|::.||:::
Mouse   169 MSTESYDQGKDRDLVMEDTGVRNEAQEEIYKK---GQSKRI---------WGELYKVIDSSDVVV 221

  Fly   179 IIVDVRYATLMFPPSLYDYIINTLK-----KHAIVVFNKVDLVEPHAVVAWRQYFRDRYPQLPVV 238
            .::|.|.......|.:..|    ||     ||.|.|.||.|||...|...|.......||.|  .
Mouse   222 QVLDARDPMGTRSPHIEAY----LKKEKPWKHLIFVLNKCDLVPTWATKRWVAVLSQDYPTL--A 280

  Fly   239 LFASFLPRSRKGSQRGPQAHRRSMEGVYNIYKECQRYVQGEVDLTTWEQKIREDMRSDQLDILDE 303
            ..||......||:                       ::|    |.....|:..|.:.        
Mouse   281 FHASLTNPFGKGA-----------------------FIQ----LLRQFGKLHTDKKQ-------- 310

  Fly   304 ISTAVEGELKISSSIDTTPHEHVKYHSGVLTIGCIGFPNVGKSSLINALKGRKVVSVSRTPGHTK 368
                                         :::|.||:|||||||:||.|:.:||.:|:...|.||
Mouse   311 -----------------------------ISVGFIGYPNVGKSSVINTLRSKKVCNVAPIAGETK 346

  Fly   369 HFQTIFLTPLVRLCDCPGLVFPSSTPKSLQVLLGSFPISQLAVPYRSLKFLGEHLNLPQLLRLHL 433
            .:|.|.|...:.|.||||:|:||...::..||.|...:.::..|.       :|:.  .:|....
Mouse   347 VWQYITLMRRIFLIDCPGVVYPSEDSETDIVLKGVVQVEKIKAPQ-------DHIG--AVLERAK 402

  Fly   434 PEDYDEWSAVAISDAWAYKRGFLTAKAAR---------PDRYRAANHILRMCLAGQQMLVLQFY- 488
            ||...:...:   ::|.....||...|.|         ||....:..:|.....|:    :.|: 
Mouse   403 PEYISKTYKI---ESWENAEDFLEKLALRTGKLLKGGEPDMLTVSKMVLNDWQRGR----IPFFV 460

  Fly   489 -PPGFEERREHWL--------------QHPD----VGEVKKYQQVELDEPESETNGDTSSVCSD- 533
             ||..|...:..|              .:|:    ..||::...:...|||.:.:.|.:|.... 
Mouse   461 KPPNAELPTDSQLPPSSPLEVPTETTQNNPEEETTETEVERSDSITEKEPEGDCSQDRNSEMQQI 525

  Fly   534 -----------------TAD-------SEDEDEDSSNDETNADEEECGIREDAPRSRN 567
                             :||       |:.||.:||.:|...::|:.|  |||...|:
Mouse   526 LARVRQNFGKINVGPQFSADDLVPVEMSDLEDLESSGEEEEQEQEQPG--EDAEEERS 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns4NP_610055.1 HSR1_MMR1 163..390 CDD:206750 61/231 (26%)
RbgA 204..474 CDD:440775 67/278 (24%)
Gnl2NP_663527.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
NGP1NT 43..174 CDD:462379 24/134 (18%)
NGP_1 209..365 CDD:206751 58/225 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 462..521 11/58 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 538..595 14/46 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 636..728
Blue background indicates that the domain is not in the aligned region.

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