Protein Alignment Ns4 and Lsg1

DIOPT Version :9

• Sequence 1: NP_610055.1
• Gene: Ns4 / 35338
• FlyBaseID: FBgn0032882
• Length: 575
• Species: Drosophila melanogaster
• Sequence 2: XP_036015788.1
• Gene: Lsg1 / 224092
• MGIID: 107236
• Length: 650
• Species: Mus musculus
• Alignment Length: 577
• Identity: 156/577 - (27%)
• Similarity: 241/577 - (41%)
• Gaps: 153/577 - (26%)

  Fly    21 QKRNTKGPPKYLRSTQESYEDSDVPETTRKLMEQPFARGGNRNKNVNRYNLQFYQEGKKELEQMK 85
            :|.|.|..|...|:...|:|:|                  .|.|.::..|.||.
Mouse    76 EKLNIKFVPPEARTGLLSFEES------------------QRIKKLHEENRQFL----------- 111

  Fly    86 QEGFKPFEKLSPAQREVDDRYFAGCDFPVRPPWTLTESKEELDRTENRYFKEYVDELQKKQRAGD 150
                            ...|.|..|   .||.|....|.|||.:.|...|.::..:|   .|..:
Mouse   112 ----------------CIPRSFYDC---FRPNWDRKTSPEELKQAEKDNFLKWRRQL---VRLEE 154

  Fly   151 SKELSL--FELNLETWRQLWRVLEFSDILLIIVDVRYATLMFPPSLYDYI--INTLKKHAIVVFN 211
            .::|.|  ||.||:.|||||||:|.|||::.|||.|...|.....|..|:  |:..|::.|:: |
Mouse   155 EQKLILTPFERNLDFWRQLWRVIERSDIVVQIVDARNPLLFRCEDLECYVKEIDAAKENVILI-N 218

  Fly   212 KVDLVEPHAVVAWRQYFRDRYPQLPVVLFASFLPR-------------SRKGSQRGPQAHRRSME 263
            |.||:......||..:|.....:   |:|.|.|..             |..|.....::...|::
Mouse   219 KADLLTAEQRFAWAVHFEKEGVK---VIFWSALAETDHLNGDLKEEVDSVAGDTNKTESESSSLD 280

  Fly   264 G-------VYNI------------YKECQRYVQGEVDLTTWEQKIREDMRSDQLDILDEISTAVE 309
            .       :.::            |::||...:.:....:.|..:.|:......|...:.....|
Mouse   281 ANEIPHRDLISLSEESASDSGDSKYEDCQEDEEEDWQTCSEEDSVPEEEEGCNADSETQNRKNAE 345

  Fly   310 GE--------------LKISSSIDTTPHEHVKYHSGVLTIGCIGFPNVGKSSLINALKGRKVVSV 360
            .:              |::...:    |...|...|.||:|.:|:|||||||.||.:.|.|.|||
Mouse   346 NQQVNNDSYLVSKQELLELFKKL----HTGKKVKDGQLTVGLVGYPNVGKSSTINTIMGNKKVSV 406

  Fly   361 SRTPGHTKHFQTIFLTPLVRLCDCPGLVFPS--STPKSLQVLLGSFPISQLA------------V 411
            |.||||||||||:::.|.:.||||||||.||  || |:..:..|..||.|:.            :
Mouse   407 SATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVST-KAEMICNGILPIDQMRDHVPPVSLVCQNI 470

  Fly   412 PYRSLKF-LGEHLNLPQLLRLHLPEDYDEW---SAVAISDAWAYKRGFLTAKAARPDRYRAANHI 472
            |.|.|:. .|.::..|:       ||.|.:   ::..:..|:...|||:||. .:||:.|:|.:|
Mouse   471 PRRVLEVTYGINIIKPR-------EDEDPYRPPTSEELLTAYGCMRGFMTAH-GQPDQPRSARYI 527

  Fly   473 LRMCLAGQQMLVLQFYPP------GFEERREHWLQHP--------DVGEVKKYQQVE 515
            |:..:.|:   :|..:||      .|:.:.:..|:..        ..|:.:|.:|:|
Mouse   528 LKDYVGGK---LLYCHPPPGKDPVAFQHQHQQLLESKVKGGELRLQPGKGRKAKQIE 581

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ns4	NP_610055.1	HSR1_MMR1	163..390	CDD:206750	84/274 (31%)
		GTPase_YlqF	165..474	CDD:274669	111/374 (30%)
Lsg1	XP_036015788.1	RbgA	157..546	CDD:224083	123/408 (30%)
		HSR1_MMR1	169..436	CDD:206750	84/274 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG1161
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55394
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820