Protein Alignment Ns4 and ngp-1

DIOPT Version :9

• Sequence 1: NP_610055.1
• Gene: Ns4 / 35338
• FlyBaseID: FBgn0032882
• Length: 575
• Species: Drosophila melanogaster
• Sequence 2: NP_492275.2
• Gene: ngp-1 / 172624
• WormBaseID: WBGene00003596
• Length: 651
• Species: Caenorhabditis elegans
• Alignment Length: 614
• Identity: 136/614 - (22%)
• Similarity: 229/614 - (37%)
• Gaps: 195/614 - (31%)

  Fly    12 GKKKKD--QMLQKRNTKGPPKYLRSTQESYEDSDVPETTRKLMEQPFARGGNRNKNVNRYNLQFY 74
            ||...|  |::.|: ||.|...|   ||..:...|..|..:..|..|
 Worm   118 GKVLSDPFQVVMKQ-TKLPISLL---QEKAKTQRVHVTETESFEYTF------------------ 160

  Fly    75 QEGKKELEQMKQEGFKPFEKLSPAQREVDDRYFAGCDFPVRPPWTLTESKEELDRTENRYFKEYV 139
              |||.|.:..:......|::|.:..:.|.:|        :|...|:..||..||.||
 Worm   161 --GKKSLRKKAKLTEASLEEMSKSAEDRDVKY--------KPELDLSREKELGDRPEN------- 208

  Fly   140 DELQKKQRAGDSKELSLFELNLETWRQLWRVLEFSDILLIIVDVRYATLMFPP--SLYDYIINTL 202
              :....|||.|..:         |.:|::|::.||:::.:||.|      .|  :...::...|
 Worm   209 --MNPLFRAGQSNRV---------WGELYKVIDSSDVVVQVVDAR------DPMGTRCRHVEEFL 256

  Fly   203 K-----KHAIVVFNKVDLVEPHAVVAW--RQYFRDRYPQLPVVLFASFLPRS-RKGSQRGPQAHR 259
            :     ||.:.|.||||||.     .|  |::..:...::|.:.|.:.:..| .||:
 Worm   257 RKEKPHKHLVTVINKVDLVP-----TWVTRKWIGELSKEMPTIAFHASINNSFGKGA-------- 308

  Fly   260 RSMEGVYNIYKECQRYVQGEVDLTTWEQKIREDMRSDQLDILDEISTAVEGELKISSSIDTTPHE 324
                 |.|:.::.              .|:..|...
 Worm   309 -----VINLLRQF--------------AKLHPDRPQ----------------------------- 325

  Fly   325 HVKYHSGVLTIGCIGFPNVGKSSLINALKGRKVVSVSRTPGHTKHFQTIFLTPLVRLCDCPGLVF 389
                    :::|.||:||||||||:|.|:.:||...:...|.||.:|.:.|...:.|.|.||:|:
 Worm   326 --------ISVGFIGYPNVGKSSLVNTLRKKKVCKTAPIAGETKVWQYVMLMRRIYLIDSPGVVY 382

  Fly   390 PSSTPKSLQVLLGSFPISQLAVPYRSLKFLGEHLNLPQLLRLH-LPE--DYDEW-SAVAISDAWA 450
            |....::..:|.|...:..:..|...::.:.:......|.|.: :||  |.|:: :.:||
 Worm   383 PQGDSETQIILKGVVRVENVKDPENHVQGVLDRCKPEHLRRQYGIPEFTDVDDFLTKIAI----- 442

  Fly   451 YKRGFLTAKAARPDRYRAANHILRMCLAGQQMLVLQFY--PPGFEER-REHWLQHP-------DV 505
             |:|.| .|...||....:..:|.....|:    |.::  |||.||| ::.:.|.|       |.
 Worm   443 -KQGRL-LKGGDPDIVAVSKVVLNEFQRGK----LPYFVPPPGCEERAKKDFSQAPINEMCADDD 501

  Fly   506 GEVKKYQQVEL-----------------DEPESETNGDTSSVC----------------SDTADS 537
            .::....|:||                 |:.|.|...:..|.|                ||..|.
 Worm   502 EQLPLDAQLELDDVARNGGPDEDDDEAIDDEEQEELTEIGSTCSGLTDLSGISDLAGDLSDADDV 566

  Fly   538 EDEDEDSSNDETNADEEECGIREDAPRSR 566
            .|:||..|:.::...:.:..:.....|.:
 Worm   567 ADDDEKPSSSDSKTKKSKTDVASVRTRGK 595

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ns4	NP_610055.1	HSR1_MMR1	163..390	CDD:206750	55/236 (23%)
		GTPase_YlqF	165..474	CDD:274669	72/322 (22%)
ngp-1	NP_492275.2	NGP1NT	61..190	CDD:285379	22/95 (23%)
		RbgA	204..491	CDD:224083	90/390 (23%)
		NGP_1	224..380	CDD:206751	52/230 (23%)
		P-loop_NTPase	329..461	CDD:304359	43/138 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910