DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ns4 and Ns2

DIOPT Version :10

Sequence 1:NP_610055.1 Gene:Ns4 / 35338 FlyBaseID:FBgn0032882 Length:575 Species:Drosophila melanogaster
Sequence 2:XP_061510310.1 Gene:Ns2 / 1270625 VectorBaseID:AGAMI1_013511 Length:692 Species:Anopheles gambiae


Alignment Length:547 Identity:126/547 - (23%)
Similarity:195/547 - (35%) Gaps:186/547 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 RNKNVNRYNLQFYQE--GKKELEQMKQEGFKPFEKLSPAQREVDDRYFAGCDFPVRPPWTLTESK 124
            |.:.|:..:.:.|..  |||:|.:......:..|.|:....|..::|              .|||
Mosquito   133 RYQRVHLLDTESYDTTFGKKKLRKRPTLKVRDLEDLTRTAEESAEQY--------------DESK 183

  Fly   125 E-ELDRTENRY---FKEYVDELQKKQRAGDSKELSLFELNLETWRQLWRVLEFSDILLIIVDVRY 185
            : :::|.:...   .:||:      ..||.||.:         |.:|.:|::.:|:||.::|.| 
Mosquito   184 DHDIERDDGGVKDAVREYI------FAAGGSKRI---------WNELHKVVDSADVLLQVLDAR- 232

  Fly   186 ATLMFPPSLYDYIINTL------KKHAIVVFNKVDLVEPHAVVAWRQYFRDRYPQLPVVLFASFL 244
                .|.......|.|.      .||...|.||||||.......|.......||  .:...||..
Mosquito   233 ----DPMGTRSKYIETFLRKEKPHKHLFFVLNKVDLVPIWVTQRWVAILSKEYP--TIAFHASLT 291

  Fly   245 PRSRKGSQRGPQAHRRSMEGVYNIYKECQRYVQGEVDLTTWEQKIREDMRSDQLDILDEISTAVE 309
            ....||:                                             .:::|.:|     
Mosquito   292 HPFGKGA---------------------------------------------LINLLRQI----- 306

  Fly   310 GELKISSSIDTTPHEHVKYHSGVLTIGCIGFPNVGKSSLINALKGRKVVSVSRTPGHTKHFQTIF 374
            |:|.:...              .:::|.||:|||||||:||||:.:||..|:...|.||.:|.|.
Mosquito   307 GKLHVDKK--------------QISVGFIGYPNVGKSSVINALRSKKVCKVAPIAGETKVWQYIT 357

  Fly   375 LTPLVRLCDCPGLVFPSSTPKSLQVLLGSFPISQLAVPYRSLKFLGEHLNLPQLLRLHL---PED 436
            |...:.|.||||:|:|::...:.:|                         |..::|:.|   |||
Mosquito   358 LMKRIFLIDCPGVVYPTAETDTEKV-------------------------LKAVVRVELVNNPED 397

  Fly   437 Y-------------------DEWS-AVAISDAWAYKRGFLTAKAARPDRYRAANHILRMCLAGQQ 481
            |                   .||: .:...:..|.|.|.| .|...||....|..||.....|: 
Mosquito   398 YIEEVLKRIRKEYVVKTYGVTEWTDHIDFLEQIARKTGKL-LKKGEPDVQTVAKMILNDWQRGR- 460

  Fly   482 MLVLQFY--PPGFEERREHWLQHPDVGEVKKYQQVELDEPESETNGDTSSVCSDTADSEDEDEDS 544
               |.||  |.|||..:..   |    |.::.|:..:|| |:|....|.        ..|||:.|
Mosquito   461 ---LPFYVAPEGFEVPKSF---H----EQQQQQETVVDE-EAEALNRTL--------QPDEDQKS 506

  Fly   545 SNDETNADEEECGIREDAPRSRNVFAL 571
            :.....|...   |.:...:.|.:|.:
Mosquito   507 TYSGVTATPT---IPDTVKKGRELFQI 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ns4NP_610055.1 HSR1_MMR1 163..390 CDD:206750 60/232 (26%)
RbgA 204..474 CDD:440775 69/292 (24%)
Ns2XP_061510310.1 None

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