DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amacr and LOC3292248

DIOPT Version :10

Sequence 1:NP_610054.1 Gene:Amacr / 35337 FlyBaseID:FBgn0032881 Length:373 Species:Drosophila melanogaster
Sequence 2:XP_061513244.1 Gene:LOC3292248 / 3292248 VectorBaseID:AGAMI1_005459 Length:425 Species:Anopheles gambiae


Alignment Length:387 Identity:111/387 - (28%)
Similarity:185/387 - (47%) Gaps:66/387 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PLKGIRVLEFVGLAPGPFCGKILTDFGATVTRIDK-------------VMENPLD-----VLQQG 48
            ||:|:|:|:...:..||:|..:|.|.||.|.:|::             .|.|..|     ...:.
Mosquito    32 PLEGVRILDLTRIVAGPYCTMVLGDLGAEVYKIERPYEGDESRKWGPPFMRNSTDSVYFMAANRN 96

  Fly    49 KRTLCLDLKNPKGQQAVQRLVKKCDVLIEPFRPGVMEKLNLGPTDLCTANPRLIYARLTGFGQHG 113
            |:::|::||.  |::.:..|.||||||:|.:.||.::.|.||...|.:..|.|:|..:||||..|
Mosquito    97 KKSVCVNLKT--GREVIYELAKKCDVLVENYVPGKLDSLGLGYETLKSIAPSLVYCSITGFGSEG 159

  Fly   114 RLAQRAGHDINYAALSGVLSMLGRRHEKVTAPINI-LADFAGGSLMCALGICLALLERHRSGKGQ 177
            ....:.|:|:..|::.|:|.:.| ..:...|.:.| :.|.|.| |.....|..|||:|||:|:||
Mosquito   160 PYKAKPGYDVIAASMGGLLHITG-SEDGPPAKVGIAITDIATG-LYAHGAILAALLQRHRTGRGQ 222

  Fly   178 VVDASMVEGAAYVASWLFMSRNLVIWGRE------RGDNLVDGGSFFYDTYETKDGRYMSVGALE 236
            .:|.::.  :..||..:.::.|.:..|:|      ..:::|.     |:.:|||.| |:::|...
Mosquito   223 KIDVNLF--STQVACLINVASNYLNAGKEAKRWGTAHESIVP-----YEAFETKAG-YITLGCGS 279

  Fly   237 PQFFEMLKQRL---ELPEDVSQFGEEHQVRGRK----LLTEAFLSKTQAEWSQIFEDVDACVYPV 294
            ...|..|.:.|   ||.:|........:|..||    :|::...||:.::|.:|||.....|.|:
Mosquito   280 DAQFVSLCRLLGVAELAQDERFASNRTRVSHRKELIAILSDILKSKSSSDWMRIFEGASFPVGPI 344

  Fly   295 LDYREVHRHDHNIQRNSFEVTEDTATPRP---------APV--------LSRTPGKLPKATD 339
            ...:||. .|.::|......|.    |.|         .||        ::..|.:|.:.||
Mosquito   345 NSMKEVF-EDRHLQAIGMVKTH----PHPLAGEVKLVGPPVVYGEAKNEITSVPPQLGQHTD 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmacrNP_610054.1 CaiB 1..366 CDD:441409 111/387 (29%)
LOC3292248XP_061513244.1 None

Return to query results.
Submit another query.