DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Amacr and Sugct

DIOPT Version :9

Sequence 1:NP_001260638.1 Gene:Amacr / 35337 FlyBaseID:FBgn0032881 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_619595.3 Gene:Sugct / 192136 MGIID:1923221 Length:436 Species:Mus musculus


Alignment Length:427 Identity:113/427 - (26%)
Similarity:195/427 - (45%) Gaps:89/427 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PLKGIRVLEFVGLAPGPFCGKILTDFGATVTRIDKVMENP---------------------LDVL 45
            ||:|:|:|:...:..|||....|.|.||.|.::    |.|                     |.| 
Mouse    38 PLEGVRILDLTRVLAGPFATMNLGDLGAEVIKV----ERPGAGDDTRSWGPPFVNTESTYFLSV- 97

  Fly    46 QQGKRTLCLDLKNPKGQQAVQRLVKKCDVLIEPFRPGVMEKLNLGPTDLCTANPRLIYARLTGFG 110
            .:.|:::.:::|:|:|.:.|:.|...|||.:|.:.||.:.::.||..|:....|.:||..:||:|
Mouse    98 NRNKKSIAVNIKDPRGVRIVKELAAICDVFVENYVPGKLSEMGLGYEDIDKIAPHIIYCSITGYG 162

  Fly   111 QHGRLAQRAGHDINYAALSGVLSMLGRRHEKVTAPINILADFAGGSLMCALGICLA-LLERHRSG 174
            |.|.::.|||:|...:|:||::.:.|........|...:.|.|.|  :.|.|..:| ||:|:|:|
Mouse   163 QTGPMSHRAGYDAIASAMSGLMHITGPEDGDPVRPGVAMTDLATG--LFAYGAIMAGLLQRYRTG 225

  Fly   175 KGQVVDASMVEG-----AAYVASWLFMSRNLVIWGRERGDNLVDGGSFFYDTYETKDGRYMSVGA 234
            ||..:|.:::..     ....|::|...:....||...| ::|.     |..::|||| |:.:||
Mouse   226 KGLFIDCNLLSSQVACLTQVAANYLIGQKEAKRWGTAHG-SIVP-----YQAFKTKDG-YLVIGA 283

  Fly   235 LEPQFFEMLKQRLELPE--DVSQFGEEH-QVRGR----KLLTEAFLSKTQAEWSQIFEDVDACVY 292
            ...|.|.::.:.|.|||  |..::...| :|:.|    |:|:..|..:..|:|..:||.......
Mouse   284 GNNQQFAVVCKILNLPELIDDCKYRTNHLRVQNRKELVKILSARFAEEVTAKWLCLFEGSGIPYG 348

  Fly   293 PVLDYREVHRHD---HN--------------------IQRNSFEVTEDTATPRPAPVLSRTPGKL 334
            |:...::|....   ||                    ::.:.|:::|    .:|.|:|.:....:
Mouse   349 PINSLKDVFSEAQVLHNGLVMEMNHPTVGKISVPGPAVRYSKFKMSE----AKPPPLLGQHTRHI 409

  Fly   335 PKATDGAQVEWMDELDLKPDE--FKDLLDSGVLSLPE 369
            .|..            |:.||  .:.||.|||:...|
Mouse   410 LKEV------------LRYDEGAIEKLLCSGVIEQHE 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmacrNP_001260638.1 CaiB 2..365 CDD:224717 111/421 (26%)
SugctNP_619595.3 CaiB 34..430 CDD:224717 111/421 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1804
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.