DRSC/TRiP Functional Genomics Resources

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Protein Alignment Amacr and ZK892.4

DIOPT Version :9

Sequence 1:NP_001260638.1 Gene:Amacr / 35337 FlyBaseID:FBgn0032881 Length:373 Species:Drosophila melanogaster
Sequence 2:NP_496163.2 Gene:ZK892.4 / 174559 WormBaseID:WBGene00014128 Length:340 Species:Caenorhabditis elegans


Alignment Length:339 Identity:139/339 - (41%)
Similarity:193/339 - (56%) Gaps:34/339 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LKGIRVLEFVGLAPGPFCGKILTDFGATVTRIDKVMENPL--DVLQQGKRTLCLDLKNPKGQQAV 65
            |.||:|:|..||||.|.||.:|.||||.||.|||  :||.  ..|.:||....||||||:..:.|
 Worm     5 LSGIKVVEIAGLAPVPHCGMMLADFGADVTVIDK--KNPAIEQRLNRGKTMKQLDLKNPEDIKKV 67

  Fly    66 QRLVKKCDVLIEPFRPGVMEKLNLGPTDLCTANPRLIYARLTGFGQHGRLAQRAGHDINYAALSG 130
            :.|.:..|||::|:|||.:||:.|.|:.|...|..||..:::|:||.||::|..||||||.||||
 Worm    68 RDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLIICKISGYGQTGRMSQETGHDINYVALSG 132

  Fly   131 VL-SMLGRRHEKVTAPINILADFAGGSLMCALGICLALLER-HRSGKGQVVDASMVEGAAYVASW 193
            :| :..|....:...|.|:|||||||.|..|.||..|:..| |..|||.::|.||.||.||::|:
 Worm   133 MLPTFSGVNATRPWPPANMLADFAGGGLSAAFGILSAIYARSHNGGKGCLLDCSMTEGVAYLSSF 197

  Fly   194 ---------LFMSRNLVIWGRERGDNLVDGGSFFYDTYETKDGRYMSVGALEPQFFEMLKQRLEL 249
                     ||..:..          |..|....|.||:|||.::::|||:||:|::.|.:.|.:
 Worm   198 VQHYYDQPNLFTDKYA----------LFSGECPIYRTYKTKDDKFVAVGAVEPKFYQNLFKLLNV 252

  Fly   250 PEDVSQFGEEHQVRGRKL---LTEAFLSKTQAEWSQIFEDVDACVYPVLDYREVHRHDHNIQRNS 311
            .      |.:..|...|:   |...||.||:.:|:.||:..:.||.||||..||..:..::.|||
 Worm   253 D------GRDLFVNPGKITEDLESRFLQKTRDKWANIFKGQECCVTPVLDIHEVGSYGQHVDRNS 311

  Fly   312 FEVTEDTATPRPAP 325
            |..|.......|:|
 Worm   312 FTKTSSNWIANPSP 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AmacrNP_001260638.1 CaiB 2..365 CDD:224717 139/339 (41%)
ZK892.4NP_496163.2 CoA_transf_3 5..313 CDD:302789 135/325 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162521
Domainoid 1 1.000 237 1.000 Domainoid score I1298
eggNOG 1 0.900 - - E1_COG1804
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H7410
Inparanoid 1 1.050 238 1.000 Inparanoid score I2121
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58683
OrthoDB 1 1.010 - - D419236at33208
OrthoFinder 1 1.000 - - FOG0006141
OrthoInspector 1 1.000 - - otm14173
orthoMCL 1 0.900 - - OOG6_104022
Panther 1 1.100 - - O PTHR22923
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3686
SonicParanoid 1 1.000 - - X4431
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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