DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and TMN3

DIOPT Version :9

Sequence 1:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_011038.3 Gene:TMN3 / 856849 SGDID:S000000915 Length:706 Species:Saccharomyces cerevisiae


Alignment Length:759 Identity:185/759 - (24%)
Similarity:320/759 - (42%) Gaps:179/759 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLPLLGVVLLHLATPTQAFYLP-----GLAPV---------------NFCKKTDVSSTCKSEILL 51
            ::.|:.:|::.|....| ||..     |..||               ||.:|.|       .:.|
Yeast     9 VITLMAIVVVMLILRNQ-FYSSRTRGHGQEPVISSSQKNLYDGWITPNFYRKGD-------PLEL 65

  Fly    52 YVNRLNTEESVIPYEYHHFDF-CLGEEQNSPVE-NLGQVVFGERIRPGPYKIQFLENQQCATTCV 114
            .||::.::.:.:||.|:...| |.......|:. :|.:::.|:|.....||::|.|:..|.|.|.
Yeast    66 IVNKVESDLTQLPYAYYDLPFTCPPTMHKKPLHLSLNEIIRGDRKWESDYKLKFGEDNPCETLCA 130

  Fly   115 -KTYKGDDPASNRRMMVLKKGISLNYQHHWIVDN-MP-VTWCYPLENGKQYCGIGFPMGCLVRSD 176
             ||.|       ..|..|.|.:...|...|::|: :| .|......:.|:|...|||:| .:..|
Yeast   131 RKTTK-------EGMQTLDKLVREGYVVQWLIDDELPAATTFISTTDHKKYYASGFPLG-FIDPD 187

  Fly   177 GEGCPINSIYNQPMHYYPFNHVDLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIKHTDKENPN 241
            .:            ..|..|||.|.|.:|:..::        ...|:..:|.|:|:  :|...|.
Yeast   188 TD------------KTYLHNHVMLVIRFHASDND--------KNTIVGFEVYPRSV--SDYHCPG 230

  Fly   242 CLSTEPLAISENSLKAGEQLEIV------------YTYSVKFVKNDSIKWSSRWDYIL---ESMP 291
            .        |:|.    ||.|||            :||||.:.:...:.|:.||||.|   |...
Yeast   231 A--------SKNY----EQYEIVIPEDENELTYLPFTYSVYWREEFEVDWNHRWDYFLNAGELSD 283

  Fly   292 HTNIQ--WFSILNSLVIVLFLSGMVAMIMLRTLHKD---------IARYNQMDSGEDAQEE-FG- 343
            ..:||  |.|:.||:.|||.:|.:..:|.:|.::.|         :.....:::.:|..:: :| 
Yeast   284 EQSIQFHWMSLANSVGIVLSISFITLIIYVRVMYTDKSNSKSPKYMINIEGIETEDDLDDDKYGK 348

  Fly   344 ---------WKLVHGDVFRPPRKGMLLSVFLGS-GVQVLVMAMITLAFACLGFLSPANRGALMTC 398
                     | :.:|   ||...|:.:.:.|.| |||.|...:.:|..:|........|.:::|.
Yeast   349 YSVYTVAKDW-IQNG---RPNLFGLKVLILLVSFGVQFLFTIIGSLTISCSMNKLHNVRNSVLTM 409

  Fly   399 SMVLFVSLGTPAGYVSARIYKSFGGLKWKSNVI--------------LTSIVC----PGVVFSLF 445
            :::.||.....|.:|..|:.......:.|:|.:              :.:|:|    ||:|....
Yeast   410 AILFFVLGAFMASFVGTRLSMVTKTKRTKANYLDDNRYLKDYKKFSPIFTILCGSSLPGIVMVST 474

  Fly   446 FVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFGFRKRALEHPVRTNQIPRQ---- 506
            |::|.::|..:|:.|:||.|::..::::|.|.:||:..|.            :..|.||..    
Yeast   475 FLLNSIVWAHDSTSALPFKTIVFFMSIYFIVCIPLSLFGG------------IVANNIPLPQYWL 527

  Fly   507 ----------------IPDQSIYTQPIP--GIVMGGVLPFGCIFIQLFFILSSLW--SSQIYYMF 551
                            :|.......|:.  ||.:.|:.|...|::::.::..|||  .:..||.:
Yeast   528 SGITKDESNSDGNGLFVPKSRAKFNPLVYCGIYLCGIFPLLVIYVEMQYVYKSLWLEKTTFYYFY 592

  Fly   552 GFLFLVFVILVITCSETTILLCY--FHLCAED----YHWWWRSFLTSGFT-AVYLFIYCCHYFVT 609
            |||||..::|.:...|.:|:..|  ...|.||    .:|.|:.| ..||: .||:.:|..:|...
Yeast   593 GFLFLSIILLCVLTMEISIIGSYLLMRFCFEDKVVRNNWRWKCF-EMGFSGGVYMELYSLYYIFA 656

  Fly   610 KLSIKDSASTFLYFGYTAIMVFLFFLLTGTIGFFACFWFIRKIY 653
            .|:|...:|..:...|:.|...:..|..|.:.:....|||.|||
Yeast   657 VLNIHGFSSILISICYSLIFNVMCSLGLGALSYLTASWFINKIY 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 157/640 (25%)
TMN3NP_011038.3 EMP70 78..663 CDD:397233 158/643 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10766
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.880

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