DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and TMN1

DIOPT Version :9

Sequence 1:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_563881.1 Gene:TMN1 / 837638 AraportID:AT1G10950 Length:589 Species:Arabidopsis thaliana


Alignment Length:673 Identity:203/673 - (30%)
Similarity:333/673 - (49%) Gaps:116/673 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLGVVLLHLATPTQAFYLPGLAPVNFCKKTDVSSTCKSEILLYVNRL----NTEESVIPYEYHHF 70
            |:.::|:.|.|||            |...:|.....:.::.|:||::    |.:|:   |.|:..
plant    10 LVFLLLVSLLTPT------------FASDSDHKYQAEEQVTLWVNKVGPYNNPQET---YNYYSL 59

  Fly    71 DFCLGEEQN-SPVENLGQVVFGERIRPGPYKIQFLENQQCATTCVKTYKGDDP--ASNRRMMVLK 132
            .||.....| .....||:|:.|..:......|:|::|.:.:..|        |  ....::...|
plant    60 PFCRPSGNNVHKWGGLGEVLGGNELIDSEIAIKFMKNVERSVIC--------PLELDEAKVKHFK 116

  Fly   133 KGISLNYQHHWIVDNMPVTW-----CYP---LENGKQYCGIGFPMGCLVRSDGEGCPINSIYNQP 189
            ..|..:|...:.:|::|: |     .:|   .||||                             
plant   117 DAIESSYWFEFFMDDLPL-WGFVGELHPDKNSENGK----------------------------- 151

  Fly   190 MHYYPFNHVDLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIKHTDKENPNCLSTEPLAISENS 254
              :..:.|.::.:.|             |..:||.|.:|        ::||            ..
plant   152 --HVLYTHKNIVVKY-------------NKDQIIHVNLT--------QDNP------------RP 181

  Fly   255 LKAGEQLEIVYTYSVKFVKNDSIKWSSRWDYILE--SMPHTNIQWFSILNSLVIVLFLSGMVAMI 317
            |:||:::::  ||||:::.. ::.::.|:|..|:  ...| .|.||||.||.::|:||:|:|:||
plant   182 LEAGKKMDL--TYSVQWIPT-NVTFARRFDVYLDYPFFEH-QIHWFSIFNSFMMVIFLTGLVSMI 242

  Fly   318 MLRTLHKDIARYNQMDSG-----EDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGSGVQVLVMAMI 377
            ::|||..|.|:|.:.|..     .|..||.||||||||||||....:|||..:|:|.|:.::.::
plant   243 LMRTLRNDYAKYAREDDDLESLERDVSEESGWKLVHGDVFRPASSLVLLSAVVGTGAQLALLVLL 307

  Fly   378 TLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGGLKWKSNVILTSIVCPGVVF 442
            .:..|.:|.|. ..|||::|..:|.:......:||||..:|...||..|...::||:.:.|.:.|
plant   308 VILMAIVGTLY-VGRGAIVTTFIVCYALTSFVSGYVSGGMYSRSGGKHWIKCMVLTASLFPFLCF 371

  Fly   443 SLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFGFR-KRALEHPVRTNQIPRQ 506
            .:.|::|.:.....|..|:||.|::.:..:|..:|.||..:|...|.. ..|..:|.|...|||.
plant   372 GIGFLLNTIAIFYGSLAAIPFGTMVVVFVIWGFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRP 436

  Fly   507 IPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYYMFGFLFLVFVILVITCSETTIL 571
            ||::..|..|....:|||:||||.|||:::|:.:|.|:.::||::||:.||||||||.....||:
plant   437 IPEKKWYLTPSVVSLMGGLLPFGSIFIEMYFVFTSFWNYKVYYVYGFMLLVFVILVIVTVCVTIV 501

  Fly   572 LCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIKDSASTFLYFGYTAIMVFLFFLL 636
            ..||.|.||:|||.|.||.::..||||:::|..:|:..|..:.....|..|||||.:......:|
plant   502 GTYFLLNAENYHWQWTSFFSAASTAVYVYLYSIYYYYVKTKMSGFFQTSFYFGYTMMFCLGLGIL 566

  Fly   637 TGTIGFFACFWFIRKIYSVVKVD 659
            .|.:|:.....|:|:||..:|.|
plant   567 CGAVGYLGSNLFVRRIYRNIKCD 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 175/567 (31%)
TMN1NP_563881.1 EMP70 54..526 CDD:397233 168/549 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D641127at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.830

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