DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and AT2G24170

DIOPT Version :9

Sequence 1:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_179994.2 Gene:AT2G24170 / 816951 AraportID:AT2G24170 Length:637 Species:Arabidopsis thaliana


Alignment Length:664 Identity:307/664 - (46%)
Similarity:422/664 - (63%) Gaps:55/664 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VVLLHLATPTQAFYLPGLAPVNFCKKTDVSSTCKSEILLYVNRLNTEESVIPYEYHHFDFCLGEE 77
            |:...|......|||||:||.:|        .....:::.||:|.:.::.:||.|:...:|..|.
plant    12 VLFFSLNVHIHGFYLPGVAPQDF--------QMGDALMVKVNKLTSTKTQLPYSYYSLPYCRPEH 68

  Fly    78 QNSPVENLGQVVFGERIRPGPYKIQFLENQQCATTC-VKTYKGDDPASNRRMMVLKKGISLNYQH 141
            .....||||:|:.|:||...|:..:..|:|.||..| ||..|       :.....|:.|:..|:.
plant    69 IVDSAENLGEVLRGDRIENSPFVFKMRESQMCAAVCRVKLDK-------KTAKAFKEKIADEYRV 126

  Fly   142 HWIVDNMPVTWCYPLENGKQYCGI----GFPMGCLVRSDGEGCPINSIY--NQPMHYYPFNHVDL 200
            :.|:||:|:.  .|::...|...:    ||.:|           :..|:  .:...|:..||:..
plant   127 NMILDNLPLV--VPVQRPDQDNVVVYQHGFHVG-----------LKGIFAGKKEEKYFIHNHLTF 178

  Fly   201 EITYHSGQSEDWGIQFGNSGRIISVKVTPKSIKHTDK----ENPNCLSTEP-----LAISENSLK 256
            .:.||.....|       |.||:..:|.|.|:||..:    |.....:.:|     :..||:..:
plant   179 TVRYHRDIQTD-------SSRIVGFEVKPFSVKHEYEGQWNEKARLTTCDPHTKRAVTNSESPQE 236

  Fly   257 AGEQLEIVYTYSVKFVKNDSIKWSSRWD-YILESMPHTNIQWFSILNSLVIVLFLSGMVAMIMLR 320
            ..|..||::||.|.|.::: :||:|||| |:|  |....|.||||:||::|||||||||||||||
plant   237 VEEGNEIIFTYDVDFQESE-VKWASRWDTYLL--MADDQIHWFSIVNSMMIVLFLSGMVAMIMLR 298

  Fly   321 TLHKDIARYNQMDSGEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGSGVQVLVMAMITLAFACLG 385
            ||::||:.|||::|.|:|.||.|||||||||||||....||.|:.|:|||...|.::|:.|||||
plant   299 TLYRDISNYNQLESHEEALEETGWKLVHGDVFRPPTNPELLCVYAGTGVQCFGMILVTMIFACLG 363

  Fly   386 FLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGGLKWKSNVILTSIVCPGVVFSLFFVMNL 450
            ||||:|||.|||..::|:|.:|..|||.|:|:||:..|.:||.|.:.|:.:.|..||..|||:|.
plant   364 FLSPSNRGGLMTAMLLLWVFMGLLAGYASSRLYKTLRGTEWKRNALKTAFMFPATVFVAFFVLNA 428

  Fly   451 VLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFGFRKRALEHPVRTNQIPRQIPDQSIYTQ 515
            ::||:.|||||||.|:.||:.||||:||||.|:|.|.||||.|.|.||:||:||||||.|:.|..
plant   429 IIWGQKSSGAVPFGTMFALVVLWFGISVPLVFIGGYIGFRKPAPEDPVKTNKIPRQIPTQAWYMN 493

  Fly   516 PIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYYMFGFLFLVFVILVITCSETTILLCYFHLCAE 580
            ||..|::||:||||.:||:|||||:|:|..|.||:|||||:||:||:|||:|.|::||||.||:|
plant   494 PIFSILIGGILPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIITCAEITVVLCYFQLCSE 558

  Fly   581 DYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIKDSASTFLYFGYTAIMVFLFFLLTGTIGFFAC 645
            ||.|||||:||||.:|||||:|...||.|||.|....|..|||||..|:.::||:.||.|||:||
plant   559 DYQWWWRSYLTSGSSAVYLFLYAVFYFYTKLEITKLVSAVLYFGYMLIVSYVFFVFTGAIGFYAC 623

  Fly   646 FWFIRKIYSVVKVD 659
            |||.|.|||.||:|
plant   624 FWFTRLIYSSVKID 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 267/565 (47%)
AT2G24170NP_179994.2 EMP70 55..594 CDD:367285 268/568 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I3428
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128721
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D641127at2759
OrthoFinder 1 1.000 - - FOG0000597
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100462
Panther 1 1.100 - - O PTHR10766
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X358
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.830

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