DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and Tm9sf1

DIOPT Version :9

Sequence 1:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:XP_038949417.1 Gene:Tm9sf1 / 361043 RGDID:1307085 Length:606 Species:Rattus norvegicus


Alignment Length:681 Identity:205/681 - (30%)
Similarity:333/681 - (48%) Gaps:118/681 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LPLLGVVLLHLATPTQAFYLPGLAPVNFCKKTDVSSTCKSEILLYVNRL----NTEESVIPYEYH 68
            ||:| ::||.:.      :.|.:..|...|..|       .::||||::    |.:|:   |.|:
  Rat    15 LPVL-ILLLGIG------HGPRVEGVTHYKPGD-------PVILYVNKVGPYHNPQET---YHYY 62

  Fly    69 HFDFCLGEEQNSPVENLGQVVFGERIRPGPYKIQFLENQQCATTCVKTYKGDDPASNRRMMVLKK 133
            ....|..|:......:||:|:.|:|:....|:|:|.||.:....|      ....|:.::..|::
  Rat    63 QLPVCCPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILC------HMQLSSAQVEQLRQ 121

  Fly   134 GISLNYQHHWIVDNMPVTWCYPLENGKQYCGIGFPMGCLVRSDGEGCPINSIYNQPMHYYPFNHV 198
            .|...|...::||::|:         :.:.|.....|.|..|...|.              :.|:
  Rat   122 AIEELYYFEFVVDDLPI---------RGFVGYMEESGFLPHSHKIGL--------------WTHL 163

  Fly   199 DLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIKHTDKENPNCLSTEPLAISENSLKAGEQLEI 263
            |..:.:|             ..|||...|:.:.:|      |:.|         :.|::.|.|.:
  Rat   164 DFHLEFH-------------GDRIIFANVSVRDVK------PHSL---------DGLRSDELLGL 200

  Fly   264 VYTYSVKFVKNDSIKWSSRWDYILESMPHTN----------------IQWFSILNSLVIVLFLSG 312
            .:||||        :||.      .|:.|.:                |.|.||:||:|:|..|.|
  Rat   201 THTYSV--------RWSE------TSVEHRSDRRRADDGGFFPRTLEIHWLSIINSMVLVFLLVG 251

  Fly   313 MVAMIMLRTLHKDIARYN---QMDSGEDA----QEEFGWKLVHGDVFR-PPRKGMLLSVFLGSGV 369
            .||:|::|.|..|:||||   :..||..:    |.:.|||::|.|||| ||.:|:|.:| ||.|.
  Rat   252 FVAVILMRVLRNDLARYNLDEETSSGGSSDDFDQGDNGWKIIHTDVFRFPPCRGLLCAV-LGVGA 315

  Fly   370 QVLVMAMITLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGGLKWKSNVILTS 434
            |.|.:....:..|.||..:....||:.:.:::|:......:||||:..|:..||.:|..|:|||:
  Rat   316 QFLALGTGIIVMALLGMFNVHRHGAINSAAILLYALTCCISGYVSSHFYRQIGGERWVWNIILTT 380

  Fly   435 IVCPGVVFSLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFGFRKRA-LEHPV 498
            .:.....|..:.|:|.|.|...|:.|:|.:|::.||.:|..|..|||.:|..||....: .:.|.
  Rat   381 SLFSVPFFLTWSVVNSVHWANGSTQALPVTTILLLLTVWLLVGFPLTVIGGIFGKNNASPFDAPC 445

  Fly   499 RTNQIPRQIPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYYMFGFLFLVFVILVI 563
            ||..|.|:||.|..|...:..:.:||.|||..|.::|::|.:::|..:.|.::|.||.||.||:.
  Rat   446 RTKNIAREIPPQPWYKSTVIHMTVGGFLPFSAISVELYYIFATVWGREQYTLYGILFFVFAILLS 510

  Fly   564 TCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIKDSASTFLYFGYTAI 628
            ..:..:|.|.||.|..|||.|||||.|:.|.|.:::|:|...|:..:.::..:..|..:|||:.:
  Rat   511 VGACISIALTYFQLSGEDYRWWWRSVLSVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLL 575

  Fly   629 MVFLFFLLTGTIGFFACFWFIRKIYSVVKVD 659
            ..::|||:.|||.||:...|||.||..:|:|
  Rat   576 TGYVFFLMLGTISFFSSLKFIRYIYVNLKMD 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 171/573 (30%)
Tm9sf1XP_038949417.1 EMP70 59..562 CDD:397233 171/574 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1278
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.830

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