DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and TM9SF4

DIOPT Version :9

Sequence 1:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_001285907.1 Gene:TM9SF4 / 34778 FlyBaseID:FBgn0028541 Length:630 Species:Drosophila melanogaster


Alignment Length:679 Identity:284/679 - (41%)
Similarity:410/679 - (60%) Gaps:75/679 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SGLL--PLLGVVLL-HLATPTQAFYLPGLAPVNFC--KKTDVSSTCKSEILLYVNRLNTEESVIP 64
            ||.|  |.|.:||| .:.....:||:||:|||.|.  :|.||.:.          ::.:..:.:|
  Fly     3 SGALARPCLAIVLLAGVVLVADSFYVPGVAPVEFVQDQKIDVKAV----------KMTSSRTQLP 57

  Fly    65 YEYHHFDFCLGEEQNSPV----ENLGQVVFGERIRPGPYKIQFLENQQCATTCVK-----TYKGD 120
            |:|:...||.  .:|..:    ||||:|:.|:||...||:::..:...|...|.:     |:..:
  Fly    58 YQYYSLRFCY--PKNGTLIFKSENLGEVLRGDRIVNTPYEVRMNQQVNCRLLCNQKDRPLTWSKE 120

  Fly   121 DPASNRRMMVLKKGISLNYQHHWIVDNMPVTWCY-----PLENGKQYCGIGFPMGCLVRSDGEGC 180
            |.|      ::.:.|...|..|.:|||:||....     |.|...::   |:.:|   :.||:..
  Fly   121 DSA------LVAERIQHEYFVHLLVDNLPVATRIVSVNNPAEVTYEH---GYRLG---QVDGDNI 173

  Fly   181 PINSIYNQPMHYYPFNHVDLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIKHTDKE--NPNCL 243
            .||            ||:...::||....:.:        |::..:|...|:.|.:.:  ...|.
  Fly   174 YIN------------NHLKFILSYHMHSKDKY--------RVVGFEVETVSVSHKELKFHGDTCN 218

  Fly   244 ---STEPLAISENSLKAGEQLEIVYTYSVKFVKNDSIKWSSRWDYILESMPHTNIQWFSILNSLV 305
               |..|..::.|.     :.::.:||||:: |...:.|:||||..| .|....|.||||:||||
  Fly   219 FPDSARPQLVNPNG-----ETQLYFTYSVEW-KESKVSWASRWDIYL-GMRDVQIHWFSIINSLV 276

  Fly   306 IVLFLSGMVAMIMLRTLHKDIARYNQMDSGEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGSGVQ 370
            :|.||||::.|||:|||.:||||||..|:.||..||.|||||||||||||:...|.|..:|||:|
  Fly   277 VVFFLSGILTMIMIRTLRRDIARYNTDDNIEDTLEETGWKLVHGDVFRPPKNTRLFSAIIGSGIQ 341

  Fly   371 VLVMAMITLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGGLKWKSNVILTSI 435
            :..||:||:.||.||.|||::||||||..:.::|.:||.|||.:||:||:..|.:||....||:.
  Fly   342 IFFMALITIFFAMLGMLSPSSRGALMTSGIFMYVFMGTIAGYYAARLYKTMKGREWKRAAFLTAT 406

  Fly   436 VCPGVVFSLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFGFRKRALEHPVRT 500
            :.||:||...|.:|..:|.::|||||||:|:|:||.||||:||||.::|.|.|:||:..:|||||
  Fly   407 LYPGIVFGTGFFLNFFIWDKSSSGAVPFTTMISLLLLWFGISVPLVYLGFYLGYRKQPYQHPVRT 471

  Fly   501 NQIPRQIPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYYMFGFLFLVFVILVITC 565
            |.||||:|.|..|...:...:|.|:||||.:||:|||:.:::|.:|.||:||||||||.|||::|
  Fly   472 NMIPRQVPTQHWYMNAVLSTLMAGILPFGAVFIELFFVFTAIWQNQFYYLFGFLFLVFCILVVSC 536

  Fly   566 SETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIKDSASTFLYFGYTAIMV 630
            ::.:|::.||.||.|||.||||||:.||.:|||:..|...||.|||.|.:...|.||.|||.:||
  Fly   537 AQISIVMTYFQLCGEDYRWWWRSFVVSGGSAVYVLFYSIFYFFTKLEITEFIPTLLYLGYTGLMV 601

  Fly   631 FLFFLLTGTIGFFACFWFIRKIYSVVKVD 659
            ..|:||||:|||||.:.||.:||..||:|
  Fly   602 LTFWLLTGSIGFFAAYVFILRIYGAVKID 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 239/567 (42%)
TM9SF4NP_001285907.1 EMP70 57..587 CDD:281048 240/570 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45461657
Domainoid 1 1.000 404 1.000 Domainoid score I99
eggNOG 1 0.900 - - E1_KOG1278
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 444 1.000 Inparanoid score I306
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 1 1.000 - - FOG0000597
OrthoInspector 1 1.000 - - mtm9200
orthoMCL 1 0.900 - - OOG6_100462
Panther 1 1.100 - - P PTHR10766
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1983
SonicParanoid 1 1.000 - - X358
1211.830

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