DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and Tm9sf3

DIOPT Version :10

Sequence 1:NP_610053.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_001414741.1 Gene:Tm9sf3 / 309475 RGDID:1564625 Length:587 Species:Rattus norvegicus


Alignment Length:629 Identity:195/629 - (31%)
Similarity:316/629 - (50%) Gaps:92/629 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KSEILLYVNRL----NTEESVIPYEYHHFDFCLGEEQNSP--VENLGQVVFGERIRPGPYKIQFL 104
            |.|::|::|.:    |.:|:   |:|....||:|.:::..  .|.||:.:.|..:......|:|.
  Rat    36 KEEVVLWMNTVGPYHNRQET---YKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFK 97

  Fly   105 ENQQCATTCVKTYKGDDPASNRRMMVLKKGISLNYQHHWIVDNMPVTWCYPLENGKQYCGIGFPM 169
            ::....|.|    :.|.....|...|.  .|..:|.:...:|::|: |                 
  Rat    98 DDVMPGTYC----EIDLDKEKRDAFVY--AIKNHYWYQMYIDDLPI-W----------------- 138

  Fly   170 GCLVRSDGEGCPINSIYNQPMHYYPFNHVDLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIKH 234
            |.:..:|..|          ..||.:.:..|||.:             |..||:.|.:|      
  Rat   139 GIVGEADENG----------EDYYLWTYKKLEIGF-------------NGNRIVDVNLT------ 174

  Fly   235 TDKENPNCLSTEPLAISENSLKAGEQLEIVYTYSVKFVKNDSIKWSSRWD-YILESMPHTNIQWF 298
                            ||..:|.....:|..:||||:.|:| :|:..|:| |:..|.....|.||
  Rat   175 ----------------SEGKVKLVPNTKIQMSYSVKWKKSD-VKFEDRFDKYLDPSFFQHRIHWF 222

  Fly   299 SILNSLVIVLFLSGMVAMIMLRTLHKDIARYNQM----DSGEDAQEEFGWKLVHGDVFRPPRKGM 359
            ||.||.::|:||.|:|:||::|||.||.|||::.    |...|..:|:|||.||||||||....:
  Rat   223 SIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHPL 287

  Fly   360 LLSVFLGSGVQVLVMAMITLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGGL 424
            :.|..:|||.|:..:::|.:..|.:..|. ..||::::.::.::.:.....||....:|...||.
  Rat   288 IFSSLIGSGCQIFAVSLIVIIVAMIEDLY-TERGSMLSTAIFVYAATSPVNGYFGGSLYARQGGR 351

  Fly   425 KWKSNVILTSIVCPGVVFSLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFGF 489
            :|...:.:.:.:.|.:|....|.:|.:....::|.|:||.|::|:..:.|.|.:||..||...| 
  Rat   352 RWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILG- 415

  Fly   490 RKRAL----EHPVRTNQIPRQIPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYYM 550
              |.|    ..|.|.|.:||.||::..:.:|...:.:||:||||.|||:::||.:|.|:.:|||:
  Rat   416 --RNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYV 478

  Fly   551 FGFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIKD 615
            :||:.||.|||.|.....||:..||.|.||||.|.|.|||::..||:|:::|..:|:..|..:..
  Rat   479 YGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYG 543

  Fly   616 SASTFLYFGYTAIMVFLFFLLTGTIGFFACFWFIRKIYSVVKVD 659
            ...|..||||.|:......::.|.||:.....|:||||:.||:|
  Rat   544 LFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_610053.1 EMP70 64..613 CDD:460774 172/559 (31%)
Tm9sf3NP_001414741.1 None

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