DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and Tm9sf3

DIOPT Version :9

Sequence 1:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_579930.1 Gene:Tm9sf3 / 107358 MGIID:1914262 Length:587 Species:Mus musculus


Alignment Length:629 Identity:195/629 - (31%)
Similarity:316/629 - (50%) Gaps:92/629 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KSEILLYVNRL----NTEESVIPYEYHHFDFCLGEEQNSP--VENLGQVVFGERIRPGPYKIQFL 104
            |.|::|::|.:    |.:|:   |:|....||:|.:::..  .|.||:.:.|..:......|:|.
Mouse    36 KEEVVLWMNTVGPYHNRQET---YKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFK 97

  Fly   105 ENQQCATTCVKTYKGDDPASNRRMMVLKKGISLNYQHHWIVDNMPVTWCYPLENGKQYCGIGFPM 169
            ::....|.|    :.|.....|...|.  .|..:|.:...:|::|: |                 
Mouse    98 DDVMPGTYC----EIDLDKEKRDAFVY--AIKNHYWYQMYIDDLPI-W----------------- 138

  Fly   170 GCLVRSDGEGCPINSIYNQPMHYYPFNHVDLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIKH 234
            |.:..:|..|          ..||.:.:..|||.:             |..||:.|.:|      
Mouse   139 GIVGEADENG----------EDYYLWTYKKLEIGF-------------NGNRIVDVNLT------ 174

  Fly   235 TDKENPNCLSTEPLAISENSLKAGEQLEIVYTYSVKFVKNDSIKWSSRWD-YILESMPHTNIQWF 298
                            ||..:|.....:|..:||||:.|:| :|:..|:| |:..|.....|.||
Mouse   175 ----------------SEGKVKLVPNTKIQMSYSVKWKKSD-VKFEDRFDKYLDPSFFQHRIHWF 222

  Fly   299 SILNSLVIVLFLSGMVAMIMLRTLHKDIARYNQM----DSGEDAQEEFGWKLVHGDVFRPPRKGM 359
            ||.||.::|:||.|:|:||::|||.||.|||::.    |...|..:|:|||.||||||||....:
Mouse   223 SIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHPL 287

  Fly   360 LLSVFLGSGVQVLVMAMITLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGGL 424
            :.|..:|||.|:..:::|.:..|.:..|. ..||::::.::.::.:.....||....:|...||.
Mouse   288 IFSSLIGSGCQIFAVSLIVIIVAMIEDLY-TERGSMLSTAIFVYAATSPVNGYFGGSLYARQGGR 351

  Fly   425 KWKSNVILTSIVCPGVVFSLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFGF 489
            :|...:.:.:.:.|.:|....|.:|.:....::|.|:||.|::|:..:.|.|.:||..||...| 
Mouse   352 RWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILG- 415

  Fly   490 RKRAL----EHPVRTNQIPRQIPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYYM 550
              |.|    ..|.|.|.:||.||::..:.:|...:.:||:||||.|||:::||.:|.|:.:|||:
Mouse   416 --RNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYV 478

  Fly   551 FGFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIKD 615
            :||:.||.|||.|.....||:..||.|.||||.|.|.|||::..||:|:::|..:|:..|..:..
Mouse   479 YGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYG 543

  Fly   616 SASTFLYFGYTAIMVFLFFLLTGTIGFFACFWFIRKIYSVVKVD 659
            ...|..||||.|:......::.|.||:.....|:||||:.||:|
Mouse   544 LFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 172/559 (31%)
Tm9sf3NP_579930.1 EMP70 56..525 CDD:397233 167/542 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.930

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