DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TM9SF2 and tm9sf3

DIOPT Version :10

Sequence 1:NP_610053.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:XP_002936010.2 Gene:tm9sf3 / 100491663 XenbaseID:XB-GENE-6033854 Length:579 Species:Xenopus tropicalis


Alignment Length:630 Identity:193/630 - (30%)
Similarity:316/630 - (50%) Gaps:94/630 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KSEILLYVNRL----NTEESVIPYEYHHFDFCLGEEQNSP--VENLGQVVFGERIRPGPYKIQFL 104
            |.|::|::|.:    |.:|:   |:|....||:|.:::..  .|.||:.:.|..:......|:|.
 Frog    28 KEEVVLWMNTVGPYHNRQET---YKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFK 89

  Fly   105 ENQQCATTC-VKTYKGDDPASNRRMMVLKKGISLNYQHHWIVDNMPVTWCYPLENGKQYCGIGFP 168
            ::....:.| :...||...|       ....|..:|.:...:|::|: |                
 Frog    90 DDVMQTSYCEIDLTKGKKDA-------FVYAIKNHYWYQMYIDDLPI-W---------------- 130

  Fly   169 MGCLVRSDGEGCPINSIYNQPMHYYPFNHVDLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIK 233
             |.:..:|..|          ..||.:.:..|||.|             |..||:.|.:|     
 Frog   131 -GIVGEADENG----------EDYYLWTYKKLEIGY-------------NGNRIVDVNLT----- 166

  Fly   234 HTDKENPNCLSTEPLAISENSLKAGEQLEIVYTYSVKFVKNDSIKWSSRWD-YILESMPHTNIQW 297
                             ||..:|.....::..:||||:.|:| :::..|:| |:..|.....|.|
 Frog   167 -----------------SEGKVKLVPNTKVQMSYSVKWKKSD-VRFEDRFDKYLDPSFFQHRIHW 213

  Fly   298 FSILNSLVIVLFLSGMVAMIMLRTLHKDIARYNQM----DSGEDAQEEFGWKLVHGDVFRPPRKG 358
            |||.||.::|:||.|:|:||::|||.||.|||::.    |...|..:|:|||.||||||||....
 Frog   214 FSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHP 278

  Fly   359 MLLSVFLGSGVQVLVMAMITLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGG 423
            ::.|..:|||.|:..:::|.:..|.:..|. ..||::::.::.::.:.....||....:|...||
 Frog   279 LMFSSLIGSGCQIFAVSLIVIIVAMIEDLY-TERGSMLSTAIFVYAATSPVNGYFGGSLYARQGG 342

  Fly   424 LKWKSNVILTSIVCPGVVFSLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFG 488
            .:|...:.:.:.:.|.:|....|.:|.:....::|.|:||.|::|:..:.|.|.:||..||...|
 Frog   343 RRWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILG 407

  Fly   489 FRKRAL----EHPVRTNQIPRQIPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYY 549
               |.|    ..|.|.|.:||.||::..:.:|...:.:||:||||.|||:::||.:|.|:.:|||
 Frog   408 ---RNLAGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYY 469

  Fly   550 MFGFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIK 614
            ::||:.||.|||.|.....||:..||.|.||||.|.|.|||::..||:|:::|..:|:..|..:.
 Frog   470 VYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMY 534

  Fly   615 DSASTFLYFGYTAIMVFLFFLLTGTIGFFACFWFIRKIYSVVKVD 659
            ....|..||||.|:......::.|.||:.....|:||||:.||:|
 Frog   535 GLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_610053.1 EMP70 64..613 CDD:460774 170/560 (30%)
tm9sf3XP_002936010.2 EMP70 47..517 CDD:460774 165/547 (30%)

Return to query results.
Submit another query.