DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and tm9sf3

DIOPT Version :9

Sequence 1:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:XP_002936010.2 Gene:tm9sf3 / 100491663 XenbaseID:XB-GENE-6033854 Length:579 Species:Xenopus tropicalis


Alignment Length:630 Identity:193/630 - (30%)
Similarity:316/630 - (50%) Gaps:94/630 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 KSEILLYVNRL----NTEESVIPYEYHHFDFCLGEEQNSP--VENLGQVVFGERIRPGPYKIQFL 104
            |.|::|::|.:    |.:|:   |:|....||:|.:::..  .|.||:.:.|..:......|:|.
 Frog    28 KEEVVLWMNTVGPYHNRQET---YKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFK 89

  Fly   105 ENQQCATTC-VKTYKGDDPASNRRMMVLKKGISLNYQHHWIVDNMPVTWCYPLENGKQYCGIGFP 168
            ::....:.| :...||...|       ....|..:|.:...:|::|: |                
 Frog    90 DDVMQTSYCEIDLTKGKKDA-------FVYAIKNHYWYQMYIDDLPI-W---------------- 130

  Fly   169 MGCLVRSDGEGCPINSIYNQPMHYYPFNHVDLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIK 233
             |.:..:|..|          ..||.:.:..|||.|             |..||:.|.:|     
 Frog   131 -GIVGEADENG----------EDYYLWTYKKLEIGY-------------NGNRIVDVNLT----- 166

  Fly   234 HTDKENPNCLSTEPLAISENSLKAGEQLEIVYTYSVKFVKNDSIKWSSRWD-YILESMPHTNIQW 297
                             ||..:|.....::..:||||:.|:| :::..|:| |:..|.....|.|
 Frog   167 -----------------SEGKVKLVPNTKVQMSYSVKWKKSD-VRFEDRFDKYLDPSFFQHRIHW 213

  Fly   298 FSILNSLVIVLFLSGMVAMIMLRTLHKDIARYNQM----DSGEDAQEEFGWKLVHGDVFRPPRKG 358
            |||.||.::|:||.|:|:||::|||.||.|||::.    |...|..:|:|||.||||||||....
 Frog   214 FSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHP 278

  Fly   359 MLLSVFLGSGVQVLVMAMITLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGG 423
            ::.|..:|||.|:..:::|.:..|.:..|. ..||::::.::.::.:.....||....:|...||
 Frog   279 LMFSSLIGSGCQIFAVSLIVIIVAMIEDLY-TERGSMLSTAIFVYAATSPVNGYFGGSLYARQGG 342

  Fly   424 LKWKSNVILTSIVCPGVVFSLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFG 488
            .:|...:.:.:.:.|.:|....|.:|.:....::|.|:||.|::|:..:.|.|.:||..||...|
 Frog   343 RRWIKQMFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILG 407

  Fly   489 FRKRAL----EHPVRTNQIPRQIPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYY 549
               |.|    ..|.|.|.:||.||::..:.:|...:.:||:||||.|||:::||.:|.|:.:|||
 Frog   408 ---RNLAGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYY 469

  Fly   550 MFGFLFLVFVILVITCSETTILLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIK 614
            ::||:.||.|||.|.....||:..||.|.||||.|.|.|||::..||:|:::|..:|:..|..:.
 Frog   470 VYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMY 534

  Fly   615 DSASTFLYFGYTAIMVFLFFLLTGTIGFFACFWFIRKIYSVVKVD 659
            ....|..||||.|:......::.|.||:.....|:||||:.||:|
 Frog   535 GLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 170/560 (30%)
tm9sf3XP_002936010.2 EMP70 48..517 CDD:367285 165/543 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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