DRSC/TRiP Functional Genomics Resources

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Protein Alignment TM9SF2 and tm9sf1

DIOPT Version :9

Sequence 1:NP_001260637.1 Gene:TM9SF2 / 35335 FlyBaseID:FBgn0032880 Length:659 Species:Drosophila melanogaster
Sequence 2:XP_002939067.1 Gene:tm9sf1 / 100486536 XenbaseID:XB-GENE-992446 Length:589 Species:Xenopus tropicalis


Alignment Length:674 Identity:196/674 - (29%)
Similarity:326/674 - (48%) Gaps:110/674 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LPLLGVVLLHLATPTQAF----YLPGLAPVNFCKKTDVSSTCKSEILLYVNRL----NTEESVIP 64
            |.||.::.:.|..|:.|.    |.||                 ..:::|||::    |.:|:   
 Frog     4 LHLLSLLCVWLVAPSPATGDNRYKPG-----------------DPVMMYVNKVGPYHNPQET--- 48

  Fly    65 YEYHHFDFCLGEEQNSPVENLGQVVFGERIRPGPYKIQFLENQQCATTCVKTYKGDDPASNRRMM 129
            |.|:....|..|:.......||:|:.|:|:....|:|.|.:|.:..|.|      :...|..::.
 Frog    49 YHYYQLPVCAPEQIRHKSLTLGEVLDGDRMAESMYRITFRQNVERQTLC------EMKLSLSQVE 107

  Fly   130 VLKKGISLNYQHHWIVDNMPVTWCYPLENGKQYCGIGFPMGCLVRSDGEGCPINSIYNQPMHYYP 194
            .|::.|...|...:::|::|:.              || :|               |.:...:.|
 Frog   108 ELRRAIEELYYFEFVLDDIPIR--------------GF-LG---------------YMEESGFLP 142

  Fly   195 -------FNHVDLEITYHSGQSEDWGIQFGNSGRIISVKVTPKSIKHTDKENPNCLSTEPLAISE 252
                   :.|:|:.|.|             |..|||...|:.:.:|             |.::.:
 Frog   143 HTHKIGLWAHLDINIEY-------------NDDRIIYSNVSVRDVK-------------PFSLDD 181

  Fly   253 NSLKAGEQLEIVYTYSVKFVKNDSIKWSSRWDYILES--MPHT-NIQWFSILNSLVIVLFLSGMV 314
                ..|.|.:.:|||:.:..: ::.:..|.|.:.:|  .|.: .|.|.||:||:|:|..|.|.|
 Frog   182 ----VRETLSLTHTYSIHWFPS-TVTYERRGDRLRDSSFFPKSLEIHWLSIINSMVLVFLLLGFV 241

  Fly   315 AMIMLRTLHKDIARYNQMDSGEDAQE--EFGWKLVHGDVFR-PPRKGMLLSVFLGSGVQVLVMAM 376
            .:|::|.|..|:||||..:.|.|..|  :.|||::|.|||| ||.:.:|.:| ||.|.|.|.:..
 Frog   242 VIILMRVLKSDLARYNLDEEGADDMEQGDNGWKIIHTDVFRFPPYRSLLCAV-LGVGFQFLALGT 305

  Fly   377 ITLAFACLGFLSPANRGALMTCSMVLFVSLGTPAGYVSARIYKSFGGLKWKSNVILTSIVCPGVV 441
            ..:....||..:....||:.:.:::|:......:||||:..|:..||.:|..|::||:.:.....
 Frog   306 GIIVMVLLGLFNVHRHGAINSAAILLYALTCCVSGYVSSNFYRQLGGDRWVWNIVLTTSLFSAPF 370

  Fly   442 FSLFFVMNLVLWGENSSGAVPFSTLIALLALWFGVSVPLTFVGAYFGFRKRA-LEHPVRTNQIPR 505
            |..:.|:|.|.|...|:.|:|.:|::.||.:|..|..|||.:|..||..... .|.|.||..|.|
 Frog   371 FLTWSVVNSVHWANGSTQALPATTILLLLTVWLLVGFPLTVIGGIFGKNSAVNFEAPCRTKNIAR 435

  Fly   506 QIPDQSIYTQPIPGIVMGGVLPFGCIFIQLFFILSSLWSSQIYYMFGFLFLVFVILVITCSETTI 570
            :||.|..|......:.:||.|||..|.::|::|.:::|..:.|.::|.||:||.||:...:..::
 Frog   436 EIPRQPWYKSAPVHMAIGGFLPFSAISVELYYIFATVWGREQYTLYGILFIVFAILLSVGACISV 500

  Fly   571 LLCYFHLCAEDYHWWWRSFLTSGFTAVYLFIYCCHYFVTKLSIKDSASTFLYFGYTAIMVFLFFL 635
            .|.||.|..|||.|||||.|::|.|..::|:|...|:..:.::.....|..:|||:.:..::|||
 Frog   501 ALTYFQLSGEDYRWWWRSVLSTGSTGAFIFLYSVFYYWRRSNMSGVVQTVEFFGYSFLTAYVFFL 565

  Fly   636 LTGTIGFFACFWFIRKIYSVVKVD 659
            :.|.:.|.|...|||.||..:|:|
 Frog   566 MLGAVSFTASLRFIRYIYINLKMD 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TM9SF2NP_001260637.1 EMP70 64..613 CDD:397233 165/562 (29%)
tm9sf1XP_002939067.1 EMP70 48..546 CDD:281048 165/568 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53553
OrthoDB 1 1.010 - - D135708at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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