DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and nanX

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_418699.4 Gene:nanX / 948807 ECOCYCID:EG12544 Length:405 Species:Escherichia coli


Alignment Length:457 Identity:84/457 - (18%)
Similarity:156/457 - (34%) Gaps:140/457 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 WSSIVID-FDLV----------CD---QDIYPT-IGLAALNTGGPVGVYLFGLLNDRGGRRLSYF 210
            |...|.| ||.:          .|   .||..| ||..|. ...|:|...||.:.|:.||:....
E. coli    21 WLGYVFDGFDFMMIFYILHIIKADLGITDIQATLIGTVAF-IARPIGGGFFGAMADKYGRKPMMM 84

  Fly   211 VCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYT 275
            ..:.....|:.::.::.:.:..|..|.||||.:...|......::|...:|.:|..:....:.::
E. coli    85 WAIFIYSVGTGLSGIATNLYMLAVCRFIVGLGMSGEYACASTYAVESWPKNLQSKASAFLVSGFS 149

  Fly   276 SGIMLLSGV--TYLE-RDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAK 337
            .|.::.:.:  .:.| ..|....:|..||...........|||..|:                  
E. coli   150 VGNIIAAQIIPQFAEVYGWRNSFFIGLLPVLLVLWIRKSAPESQEWI------------------ 196

  Fly   338 VNGREFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTI-------LITLSWFAN 395
                               .||.|.:...::      :.|.|::.:..|       |...:|..|
E. coli   197 -------------------EDKYKDKSTFLS------VFRKPHLSISMIVFLVCFCLFGANWPIN 236

  Fly   396 ------------------------------ETVYLGLSYYGPALGTNQYVSFFLSAVVELPSYLC 430
                                          .|::.|  :.|..:|..:   .|:..::....:||
E. coli   237 GLLPSYLADNGVNTVVISTLMTIAGLGTLTGTIFFG--FVGDKIGVKK---AFVVGLITSFIFLC 296

  Fly   431 CWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASFLIIYPFAGELY 495
            ..:|:.       :..|.::|  .|:..:|..:..:           |.|...|:..|      :
E. coli   297 PLFFIS-------VKNSSLIG--LCLFGLMFTNLGI-----------AGLVPKFIYDY------F 335

  Fly   496 PTQVRGIGIGASSYIGGLGLIGIPFI-TY------LGKDNLKLPLVIMGFLSMLGGMTGLRLPET 553
            ||::||:|.|....:|..|.:..|.: ||      ||   :.|.:|.:.|.::|..:.|..:|..
E. coli   336 PTKLRGLGTGLIYNLGATGGMAAPVLATYISGYYGLG---VSLFIVTVAFSALLILLVGFDIPGK 397

  Fly   554 LH 555
            ::
E. coli   398 IY 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 83/451 (18%)
xylE <306..>342 CDD:182225 4/35 (11%)
nanXNP_418699.4 PRK12307 1..405 CDD:237051 84/457 (18%)

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