DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and yaaU

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_414587.1 Gene:yaaU / 944766 ECOCYCID:EG11566 Length:443 Species:Escherichia coli


Alignment Length:437 Identity:107/437 - (24%)
Similarity:165/437 - (37%) Gaps:95/437 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 IGLAALNT--GGPVGVYLFGLLNDRGGRRLSYF--------VCLATLLAGSLMTSLSKDFWTWAG 234
            |||....|  |..||..|||.::|:.|||..:.        :.:||:...|.:..|.        
E. coli    55 IGLLGAGTLAGLFVGTSLFGYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLV-------- 111

  Fly   235 SRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTY----LERDWVRLS 295
            .||::|:.|.|.|.|...:..|......|:|........:..|......|.|    :|..|..:.
E. coli   112 MRVLIGIVIGADYPIATSMITEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWML 176

  Fly   296 YITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEAQIR-RDK 359
            ...::|.....:..|.:||||||||.:||::|.   .|.|.|:.|.  |.|...:...|.| ||.
E. coli   177 GSAAIPCLLILIGRFELPESPRWLLRKGRVKEC---EEMMIKLFGE--PVAFDEEQPQQTRFRDL 236

  Fly   360 LKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGP--------------ALG 410
            ..::....                 .:.:...|.........:..:||              |||
E. coli   237 FNRRHFPF-----------------VLFVAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALG 284

  Fly   411 TNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLV 475
            ......||:...:  |..|  |  ::|.|||..|..|..:..:|..:..::||      :.::||
E. coli   285 NVVISLFFMLGCI--PPML--W--LNTAGRRPLLIGSFAMMTLALAVLGLIPD------MGIWLV 337

  Fly   476 SKALLSASFLI--------IYPFAGELYPTQVRGIGIGASSYIGGLGLI----GIP-FITYLGKD 527
            ..|....:|..        :||  .||:||.:|...:|....:..:|.|    .:| ||...|..
E. coli   338 VMAFAVYAFFSGGPGNLQWLYP--NELFPTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGIS 400

  Fly   528 NLKLPLVIMGF-LSMLGGMTGLRL-PETLHHRLPQTIE---EGEEFG 569
            |    .::||. :|:.|.:..:.. |||....|.||..   .|:..|
E. coli   401 N----TMLMGAGISLFGLLISVAFAPETRGMSLAQTSNMTIRGQRMG 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 99/414 (24%)
xylE <306..>342 CDD:182225 16/35 (46%)
yaaUNP_414587.1 MFS_SV2_like 20..418 CDD:340874 99/410 (24%)

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