DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and HXT9

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_012316.1 Gene:HXT9 / 853236 SGDID:S000003755 Length:567 Species:Saccharomyces cerevisiae


Alignment Length:539 Identity:121/539 - (22%)
Similarity:201/539 - (37%) Gaps:132/539 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 GVNWTQLLESGEEDDLTTMEPN------------------------ASWPLIKCPQ--------- 151
            |||.|      ..:||:|.|.|                        |:.|.|..||         
Yeast     3 GVNNT------SANDLSTTESNSNSVANAPSVKTEHNDSKNSLNLDATEPPIDLPQKPLSAYTTV 61

  Fly   152 --------------GWEYNT---SVVWSSIVIDFDLVCDQDIY----PTIGL--AALNTGGPVGV 193
                          ||:..|   .|..|..:..|....|:..|    ..:||  :..|.|..:|.
Yeast    62 AILCLMIAFGGFIFGWDTGTISGFVNLSDFIRRFGQKNDKGTYYLSKVRMGLIVSIFNIGCAIGG 126

  Fly   194 YLFGLLNDRGGRRLSYFVCLATLLAGSL--MTSLSKDFWTWAGSRVIVGLTIPAVYQI-PFIISL 255
            .:...:.|..|||:......|..:.|.|  :||::|.:..:.| |:|.||.:..:..: |.:|| 
Yeast   127 IVLSKVGDIYGRRIGLITVTAIYVVGILIQITSINKWYQYFIG-RIISGLGVGGIAVLSPMLIS- 189

  Fly   256 ELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLERDW-------VRLSYITSLPFYAYFLYMFVMP 313
            |:..:..|..:..:.....|.||.|.....|..:::       |.|....:...:.....||| |
Yeast   190 EVAPKQIRGTLVQLYQLMCTMGIFLGYCTNYGTKNYHNATQWRVGLGLCFAWTTFMVSGMMFV-P 253

  Fly   314 ESPRWLLMRGRLEEALKILERMAKVNGREFPE--AVHLKLEAQIRRDKLKKQKKKMANVGLADLC 376
            ||||:|:..|:.|||.:.|.:..||:..: |.  |.:..::|.|..:||      ..|...::|.
Yeast   254 ESPRYLIEVGKDEEAKRSLSKSNKVSVDD-PALLAEYDTIKAGIELEKL------AGNASWSELL 311

  Fly   377 RTPNMRLKTILI-----TLSWFANETVYLGLSYYGPALG-----TNQYVSFFLSAVVELPSYLCC 431
            .|.....:.:|:     :|.....:..:.   |||..:.     .:.:.:..:..||...|....
Yeast   312 STKTKVFQRVLMGVMIQSLQQLTGDNYFF---YYGTTIFKSVGLKDSFQTSIIIGVVNFFSSFIA 373

  Fly   432 WYFMDTWGRRWPLSLSMILGGVACV-----------ITVMLPDDAVDETLVLYLVSKALLSASFL 485
            .|.::.:|||     :.:|.|.|.:           :|.:.|..:..:.:........::..:..
Yeast   374 VYTIERFGRR-----TCLLWGAASMLCCFAVFASVGVTKLWPQGSSHQDITSQGAGNCMIVFTMF 433

  Fly   486 IIYPFA-----------GELYPTQV--RGIGIG-ASSYIGGLGLIGI--PFITYLGKDNLKLPLV 534
            .|:.||           .|.:|.:|  ||:.|. |::::.|. ||..  ||||  |..|.....|
Yeast   434 FIFSFATTWAGGCYVIVSETFPLRVKSRGMAIATAANWMWGF-LISFFTPFIT--GAINFYYGYV 495

  Fly   535 IMGFLSMLGGMTGLRLPET 553
            .:|.|..........:|||
Yeast   496 FLGCLVFAYFYVFFFVPET 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 121/539 (22%)
MFS 182..551 CDD:119392 95/419 (23%)
HXT9NP_012316.1 Sugar_tr 64..526 CDD:395036 107/472 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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