DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and OCT2

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_178054.1 Gene:OCT2 / 844274 AraportID:AT1G79360 Length:527 Species:Arabidopsis thaliana


Alignment Length:527 Identity:133/527 - (25%)
Similarity:217/527 - (41%) Gaps:74/527 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 PLEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLE------SGEEDD-------LTTMEPNASW 144
            ||....:.|.|:.|  |:.:.|...::|  |.|.|:      ||..|.       .|..||  :|
plant     7 PLLTDSNSSSPRSL--DDTIESYIGSFG--WAQFLQAALVSFSGVFDAQQTFISVFTDSEP--TW 65

  Fly   145 P-----------------LIKCPQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVG 192
            .                 |.|....|:|:..|   |::.::.|.|.......:..::...|..:|
plant    66 HCTDSNSICHESISNICILPKTAWSWDYSPHV---SVISEWGLQCAGSFVKGLPESSFFVGCLIG 127

  Fly   193 VYLFGLLNDRG-GRRLSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLE 256
            ..:...|.|.. ||:...|:....:...:::|..|.:.|.:|..|.:.|.....:.....::|.|
plant   128 GLVLSTLADSSLGRKNMLFLSCLVMAISTMLTVFSPNIWVYAVLRFVNGFGRATIGTCALVLSTE 192

  Fly   257 LVGENYRSFVTVMTCTFYTSGIMLLSGVTYLER--DWVRLSYITSLPFYAY-FLYMFVMPESPRW 318
            |||:.:|..|.:|:...:..|.:.|..:.|:.|  .|..|...||:|...| .|..|.:.|||||
plant   193 LVGKKWRGRVGIMSFFGFMLGFLSLPLMAYMNRGSSWRILYAWTSIPTIIYCVLVRFFVCESPRW 257

  Fly   319 LLMRGRLEEALKILERMAKVNGREFPE--AVHLKLEA-QIRRDKLKKQKKKMANVGLADLCRTPN 380
            |.:|||.|||:.||:|:|.:...:...  |:.:...: ....|    ::|...||.:....:   
plant   258 LFVRGRREEAISILKRVASIPSTDVSSGGAISMSFSSLPFEED----EEKPSTNVNIFTTMK--- 315

  Fly   381 MRLKTILITLSWFANE-------TVYLGLSYYGPALGT-----NQYVSFFLSAVVELPSYLCCWY 433
                 :|:...|....       ...:||.|||..|..     |.|:|...:|:::||:.|...:
plant   316 -----VLVEKRWALKRLSAVMAIAFGIGLVYYGMPLALSNLDFNIYLSAAFNALMDLPANLITLF 375

  Fly   434 FMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDE----TLVLYLVSKALLSASFLIIYPFAGEL 494
            .:|...||..|.....||||:.|:...|.:..:..    .|.|.|:|.....::|.:...:..||
plant   376 LVDKLSRRNALIGFTALGGVSSVLIFALHNMRIGNHGALQLALELISYFSACSAFNMEMIYTIEL 440

  Fly   495 YPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLP 559
            :||.||...|..:.....||.:..|.:...|:.|......:.|....|.|:..:.||||....|.
plant   441 FPTCVRNSAIAMARQALVLGGVFSPIMVAAGRKNAFWSFGLFGLAIGLLGLFAVGLPETRGSDLC 505

  Fly   560 QTIEEGE 566
            .|::|.|
plant   506 DTMDEEE 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 130/520 (25%)
MFS 182..551 CDD:119392 99/391 (25%)
OCT2NP_178054.1 MFS_OCT_plant 79..497 CDD:340936 107/432 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 1 1.000 - - mtm1022
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.020

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