DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and OCT6

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_173087.1 Gene:OCT6 / 838207 AraportID:AT1G16370 Length:521 Species:Arabidopsis thaliana


Alignment Length:148 Identity:35/148 - (23%)
Similarity:51/148 - (34%) Gaps:45/148 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 REKPVTDSAANLGISSNGSLLLSNGKHGVVWSTGDIFASNG--SRAELTDHGNLVFIDKVSGRT- 116
            |..|:|...| .|..|      .:|.....:|||.|.|.:|  |...||...|||::|:....| 
plant    11 RSAPITFPVA-FGSQS------KSGSGAFRFSTGAIAALSGGFSYYYLTSGNNLVYLDQAKEETG 68

  Fly   117 --------LWQSFE--------------------------HLGNTLLPTSIMMYNLVAGEKRGLT 147
                    .|..|:                          |:.:.||..:.:.||.....|..:.
plant    69 PKTALNPDKWLEFKLQDTARVSHNTQLFRFSFDPSAELGLHVASCLLTRAPLGYNAEGKTKYVIR 133

  Fly   148 AWKSYTDP-SPGEFVALI 164
            .:...:|| :.|.|..||
plant   134 PYTPISDPEAKGYFDLLI 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 6/14 (43%)
xylE <306..>342 CDD:182225
OCT6NP_173087.1 MFS_OCT_plant 88..494 CDD:340936 12/64 (19%)
xylE <220..>314 CDD:182225
Blue background indicates that the domain is not in the aligned region.

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