DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and PHT1;4

DIOPT Version :10

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_181428.1 Gene:PHT1;4 / 818479 AraportID:AT2G38940 Length:534 Species:Arabidopsis thaliana


Alignment Length:526 Identity:97/526 - (18%)
Similarity:186/526 - (35%) Gaps:135/526 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 WEYNTSVVWSSI---VIDFDLVCDQDIYPTIG-------------------LAALN----TGGPV 191
            |.:.|:::.:.:   ...:||.|...:...:|                   .||:|    .|...
plant    19 WYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGAQKPGTLPPNVAAAVNGVAFCGTLA 83

  Fly   192 GVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSLSKD--------------FWTWAGSRVIVGLT 242
            |...||.|.|:.||:..|.:.|..::..|:.:.||..              ||        :|..
plant    84 GQLFFGWLGDKLGRKKVYGMTLMVMVLCSIASGLSFGHEPKAVMATLCFFRFW--------LGFG 140

  Fly   243 IPAVYQIPFIISLELVGENYR-SFVTVMTCTFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYF 306
            |...|.:...|..|...:..| :||:.:   |...|..:::|..:        :.|.|..|.|.|
plant   141 IGGDYPLSATIMSEYANKKTRGAFVSAV---FAMQGFGIMAGGIF--------AIIISSAFEAKF 194

  Fly   307 ---LYM-----FVMPESP---RWLLMRGRLEEALKILERM---------------AKVNGREFPE 345
               .|.     ..:|::.   |.:||.|.:..|:....|.               ||....:..:
plant   195 PSPAYADDALGSTIPQADLVWRIILMAGAIPAAMTYYSRSKMPETARYTALVAKDAKQAASDMSK 259

  Fly   346 AVHLKLE-AQIRRDKLKKQKKK---------MANVGLADLCRTPNMRLKTILITLSWFANETVYL 400
            .:.:::| .|.:.:::.|:|.|         |:..||..|..|....|..|.........:.::.
plant   260 VLQVEIEPEQQKLEEISKEKSKAFGLFSKEFMSRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFS 324

  Fly   401 GLSYYGPALGTNQYVSFFLSAVVELPSYLCC-----WY---FMDTWGRRWPLSLSMILGGVACVI 457
            .:.:..||...|.....|..|..:....||.     |:   |:|..| |:.:.:.........:.
plant   325 AIGWIPPAQSMNAIQEVFKIARAQTLIALCSTVPGYWFTVAFIDVIG-RFAIQMMGFFFMTVFMF 388

  Fly   458 TVMLPDD-----------AVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIG 511
            .:.:|.:           .:..:|..:..:....:.:|::    ..|::|.:.|....|.|:..|
plant   389 ALAIPYNHWTHKENRIGFVIMYSLTFFFANFGPNATTFVV----PAEIFPARFRSTCHGISAASG 449

  Fly   512 GLG-LIGIPFITYLGKD--------------NLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQT 561
            .|| ::|.....||.::              .::..|:::|.::.||.:....:||:....|.:.
plant   450 KLGAMVGAFGFLYLAQNPDKDKTDAGYPPGIGVRNSLIVLGVVNFLGILFTFLVPESKGKSLEEM 514

  Fly   562 IEEGEE 567
            ..|.|:
plant   515 SGENED 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 MFS_SLC22 152..551 CDD:340875 92/508 (18%)
xylE <306..>342 CDD:182225 11/61 (18%)
PHT1;4NP_181428.1 2A0109 11..516 CDD:129965 95/520 (18%)

Return to query results.
Submit another query.