DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and slc22a21

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001295487.1 Gene:slc22a21 / 799908 ZFINID:ZDB-GENE-091118-62 Length:546 Species:Danio rerio


Alignment Length:530 Identity:162/530 - (30%)
Similarity:277/530 - (52%) Gaps:14/530 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPLEQRKS 99
            |.::....:|.:|.:||.:...:|| :.||.||...:.:|:.|||..: |||||.|:|....|.:
Zfish     5 DYEEQTAFLGAWGPFQKTVFSLLCL-SIIPNGFTGLSIVFLGDTPAHH-CRIPETLNLTAGWRNA 67

  Fly   100 LSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNAS-WPLIKCPQGWEYNTSVVWSS 163
             |:|:...:.:...|:||...::..:....|  ..|..::.|.| .|..:|..||.|:..:..|:
Zfish    68 -SVPRPQPHGDPRASRCYRLRLDLVKNYSDG--GLLPGLDVNVSEIPREECADGWIYDKEIYSST 129

  Fly   164 IVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSLSKD 228
            ||.::||||..|....:..:....|...|..:.|.::||.||::..||.:|.....:::...|..
Zfish   130 IVSEWDLVCSDDWKSPLTSSIFFCGVLTGSVISGPVSDRFGRKIVLFVTMAIQTLFTVVQVFSPS 194

  Fly   229 FWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRS-FVTVMTCTFYTSGIMLLSGVTYLERDWV 292
            :..:.....|||:...:.|...|::.:|::..:.|. :.|:..|.|::.|.|:|....:..|||.
Zfish   195 WQIFCFLFFIVGMGQISNYVAAFVLGMEILSSSVRDVYSTLGVCLFFSIGYMILPLAAFFLRDWR 259

  Fly   293 RLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEAQIRR 357
            .|....::|.:.|....:.:||||||||.:||::||..|:.:.||:|....|:.:...:::    
Zfish   260 SLMLALTIPGFFYIPLWWFIPESPRWLLSQGRVQEAEAIIRKAAKINRVTAPDVIFPLMQS---- 320

  Fly   358 DKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYVSFFLSAV 422
               .:....:.:..:.:|.::.|:|..|.|:.|.|.|....|..||....:|..|.|::..||||
Zfish   321 ---TEDAGGVQSFSVCELLKSSNIRYMTGLLCLIWMAVSIGYCALSLNTSSLHGNIYLNCLLSAV 382

  Fly   423 VELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASFLII 487
            ||:|:.|..|..:....||..|:.::.|||:..::.:::|:|....||.|.::.|..|||:|.||
Zfish   383 VEVPALLMAWLMLRLAPRRHCLASTLALGGLVLLLILLIPEDQSSVTLALVMLGKFGLSAAFSII 447

  Fly   488 YPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPE 552
            ||...|||||.:|...:||.|....:|.|..|:..|||..:..||.:::|.:::|.|:....|||
Zfish   448 YPVTAELYPTVLRNTALGACSMSSRVGGISAPYFNYLGSYHRSLPYILIGGINVLSGLLSFLLPE 512

  Fly   553 TLHHRLPQTI 562
            :....||:||
Zfish   513 SRGSALPETI 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 159/518 (31%)
MFS 182..551 CDD:119392 110/369 (30%)
slc22a21NP_001295487.1 2A0119 14..521 CDD:273328 159/518 (31%)
MFS 146..511 CDD:119392 110/371 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D375160at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.030

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