DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and Slc22a17

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001347335.1 Gene:Slc22a17 / 59049 MGIID:1926225 Length:520 Species:Mus musculus


Alignment Length:528 Identity:138/528 - (26%)
Similarity:213/528 - (40%) Gaps:93/528 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 CYTYGV------NWTQ-------------LLESGEEDDLTTMEPNASW----PLIKCPQGWEYN- 156
            |: ||.      .|.|             |..|.....:|:.:|:.|.    ....|.:.|:|| 
Mouse    15 CH-YGALPPNASGWEQPPNSSGVSVAGAALAASAASGVVTSTDPSCSGFAPPDFNHCLKDWDYNG 78

  Fly   157 TSVVWSSIVIDFDLVCD-------QDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLA 214
            ..|:.::.:..:|||||       :.|...:|.|:       |....|...||.|||   .:.|.
Mouse    79 LPVLTTNAIGQWDLVCDLGWQVILEQILFILGFAS-------GYLFLGYPADRFGRR---GIVLL 133

  Fly   215 TL-LAGSLMTSLSKDFWTWAGS-------RVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTC 271
            || |.|......:.     |||       |.::|..:..|....:::.|||.....|..|.:...
Mouse   134 TLGLVGPCGVGGAA-----AGSSTGIMALRFLLGFLLAGVDLGVYLMRLELCDPTQRLRVALAGE 193

  Fly   272 TFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLY----MFVMPESPRWLLMRGRLEEALKIL 332
            .....|..|..|:..:.:||..|..:.:.|...:..|    :|:  ||.|||:::.::|||..:|
Mouse   194 LVGVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFL--ESARWLIVKRQIEEAQSVL 256

  Fly   333 ERMAKVNGREFPEAVHLKLEAQIRRDKLKK--QKKKMANVGLADLCRTPNMRLKTILITLSWFAN 395
            ..:|:   |..|....|..|||....:|:.  .....:....|.|....|: .|.:||.  .|.|
Mouse   257 RILAE---RNRPHGQMLGEEAQEALQELENTCPLPATSTFSFASLLNYRNI-WKNLLIL--GFTN 315

  Fly   396 ETVYLGLSYYGPALGTNQYVSFFL-SAVVELPSYLCCWYF---MDTWGRRWPLSLSMILGGVACV 456
            ...:.....|.|..|......|:| |.:....:.|.|.:.   :|.:|||..|.|||.|.|:|.:
Mouse   316 FIAHAIRHCYQPVGGGGSPSDFYLCSLLASGTAALACVFLGVTVDRFGRRGILLLSMTLTGIASL 380

  Fly   457 ITV----MLPDDAVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIG 517
            :.:    .|.|.|:....||.|.|.   .||.::....|.|:.||.|||.|:|....:|.||.:.
Mouse   381 VLLGLWDYLNDAAITTFSVLGLFSS---QASAILSTLLASEVIPTTVRGRGLGLIMALGALGGLS 442

  Fly   518 IPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCCRCAQ 582
            .|...........|..|::...::|..::.:.||||....||:.:.:||          .||   
Mouse   443 CPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDGE----------LCR--- 494

  Fly   583 KPEILSQP 590
            :|.:|.||
Mouse   495 RPSLLRQP 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 130/497 (26%)
MFS 182..551 CDD:119392 102/390 (26%)
Slc22a17NP_001347335.1 MFS_SLC22A17 63..476 CDD:341003 114/438 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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