DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and slc22a31

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_699154.4 Gene:slc22a31 / 570565 ZFINID:ZDB-GENE-130530-858 Length:610 Species:Danio rerio


Alignment Length:588 Identity:144/588 - (24%)
Similarity:240/588 - (40%) Gaps:121/588 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LLPTIGEFGKYQKLLV-------FGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELL------ 90
            :.|.:|.:|:|.:::.       |.:.|.        .|..:|....|:.|.|:..:.|      
Zfish     7 IYPQVGGYGRYNRIITLFSWFPNFAVSLN--------LFTDVFFTLVPESYHCKPDQALLPPSAL 63

  Fly    91 --DLPLEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQGW 153
              :|..:...:|::| .|......:.:.|.|.||.:...:..|.|            ::.|..||
Zfish    64 LSNLSRQAYLNLTVP-WLKGSGFSHCELYKYPVNVSNYTDDVERD------------VVSCTGGW 115

  Fly   154 EYNTSV-VWSSIVIDFDLVCDQDIYPTIGL--AALNTGGPVGVYLFGLLNDRGGRRLSYFVCLAT 215
            |::... :.:::|.:::||||.  |..|.|  ....||..:|..|.|.|.|..|||.:  :.|:.
Zfish   116 EFSKPAGLQNNLVTEWNLVCDD--YWKIPLQHICFMTGWTLGYILLGTLCDWLGRRRA--LLLSV 176

  Fly   216 LLAG--SLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGI 278
            :|:|  .:|..:|.....:...|:..|.|:..|:...:|..||....::|..|::::..|.....
Zfish   177 VLSGLLGIMACISNSPSAFPFLRLCQGSTLAGVFLSSYIARLEWCDPSHRLMVSMVSGFFAVFAE 241

  Fly   279 MLLSGVTYLERDWVRLSYITSLP---FYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNG 340
            :||.|:..|.|||..|..:.:||   ..:|:....|.||||||||...::.:|.:.|:..:..||
Zfish   242 LLLPGLAVLCRDWPVLQAVATLPLLLLLSYWCCASVFPESPRWLLATAQIPQAKECLQSFSARNG 306

  Fly   341 ------------------REFPEAV----HLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRL 383
                              ..|||.|    |...|                       .|...:..
Zfish   307 MCVSDELYPAETLLSEIDEAFPEDVQPEYHHVFE-----------------------LRHTRVIW 348

  Fly   384 KTILITLSWFANETVYLG----------LSYYGPALGTNQYVSFFLSAVVELPSYLCCWYF---M 435
            |..||     ...|:::|          |..|.|    :.|.|:||..   |...|.|.:.   :
Zfish   349 KNCLI-----LGFTLFIGTGIQYCFTRNLHIYSP----HFYFSYFLRV---LTGALACIFLCVTV 401

  Fly   436 DTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASFLIIYP--FAGELYPTQ 498
            |.:|||..|.|:.|:.|::.::.:.| ...:...|||.|....|||:..|.:..  |..|:.||.
Zfish   402 DRYGRRGMLLLAAIITGLSSLLLLAL-TQYLHGGLVLVLSVVGLLSSQALAMLSMFFGSEVMPTI 465

  Fly   499 VRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIE 563
            |||..:|.....|.:|:.....:.........|..||....::|..:..:.|||:.|..||.:::
Zfish   466 VRGGTLGLIMSAGCIGMAASSLMELQNNGGYFLHHVIFASFAVLSVLCIMLLPESKHKPLPDSLK 530

  Fly   564 EGE 566
            :||
Zfish   531 DGE 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 141/576 (24%)
MFS 182..551 CDD:119392 103/412 (25%)
slc22a31XP_699154.4 2A0119 12..527 CDD:273328 140/575 (24%)
MFS <347..518 CDD:119392 46/183 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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