DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and LOC566640

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_009291426.1 Gene:LOC566640 / 566640 -ID:- Length:511 Species:Danio rerio


Alignment Length:424 Identity:105/424 - (24%)
Similarity:192/424 - (45%) Gaps:45/424 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 GLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPA 245
            |.|...||..:|..:.|.|:|:.|:::....|.|.....:::.:.......:..:|.|.|::..|
Zfish    91 GQATYMTGLLIGSLIGGALSDKYGKKILLICCTAIHAVATVIVAFLPYVPVYLTARAISGVSCCA 155

  Fly   246 VYQIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMF 310
            ::...:.:.:|.....||.:...:....::.|:|.|:.|.:|...|::......:|...:....|
Zfish   156 IHICTYSLGVEWSLPKYRIWPPTLFSFIFSLGMMGLAAVAFLSSTWIQFHLALGIPQILFLPLYF 220

  Fly   311 VMPESPRWLLMRGRLEEALKILERMAKVNGREFPEAVH-LKLEAQIRRDKLKKQKKKMANVGLAD 374
            .:||||||||:..|: :.|:..:..:..:.|.....:| :..|||      |...:|.:....::
Zfish   221 FLPESPRWLLLNKRM-KTLESYQNRSSKDKRYLDLLLHSVDNEAQ------KSLSEKSSTETRSN 278

  Fly   375 LCR--TPNMRLKTILITLSWFANETVYLGLSYYGPALGTNQYVSFFLSAVVELPSYLCCWYFMDT 437
            ...  :|.:.|:..:::...||:...|.|:.:...:.|.|.|::.|.|.:.|.||.|.. :.:..
Zfish   279 FTNFTSPIILLRLFIMSYIGFASALTYYGICFSIGSFGVNIYLAQFFSGLSEAPSLLLP-FLLKR 342

  Fly   438 WGRRWPLSL-SMILGGVACVITVMLPDDAVDETLV--LYLVSKALLSASFLIIYPFAGELYPTQV 499
            |||| |.:: |:.|.|::|::::::........||  |.|:.|..:.:::.:...:..||:||.:
Zfish   343 WGRR-PFTMGSLFLSGISCMLSLLVSKFCNMPALVMTLALMGKLCMQSTYCVSTLYGIELFPTVI 406

  Fly   500 RGIGIGASSYIGGLGLI---------GIP---FITYLGKDNLKLPLVIMGFLSMLGGMTGLRLPE 552
            |...:|..|....:..|         |||   .|:|.|.     |::        |....|.|||
Zfish   407 RQKCVGVVSLCYRVACIINAVMSPEGGIPLPAMISYSGG-----PII--------GAALCLLLPE 458

  Fly   553 TLHHRLPQTIEEGEEFGKNWQFK-DCCRCAQ-KP 584
            |....||.|:.|.|   |..:.| .||.|.. ||
Zfish   459 TSGIPLPDTVHECE---KQPRLKLSCCACGSIKP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 95/397 (24%)
MFS 182..551 CDD:119392 88/386 (23%)
LOC566640XP_009291426.1 MFS 93..455 CDD:119392 87/383 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.100

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