DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and slc22a13b

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_017209322.1 Gene:slc22a13b / 556601 ZFINID:ZDB-GENE-061013-532 Length:549 Species:Danio rerio


Alignment Length:602 Identity:169/602 - (28%)
Similarity:275/602 - (45%) Gaps:90/602 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DLDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDY----WC--RIPEL---- 89
            |...:|.::||||.:||.|:..:|||. |...|..|.|:|.|.:...|    |.  :.|.|    
Zfish     3 DFTQILSSVGEFGAFQKRLLVAVCLPN-IFTAFHMFGQVFTAISFPHYCNSSWILRQAPNLTEEK 66

  Fly    90 ---LDLPLEQRK-----SLSIPKELDNDELVYSKCYTYGVNWTQLLESGEEDDLTTMEPNASWPL 146
               |.:||:.:.     .:..|.|:|.:::.:     ||:|.|                      
Zfish    67 QLNLTVPLDSKGQYESCKMFTPVEMDIEDIEH-----YGINTT---------------------- 104

  Fly   147 IKCPQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFV 211
            ..|..||.|......|:::.:|||||:..:|.....:....|..||..|||.:.|:.|||.:..:
Zfish   105 TSCIDGWVYKAPKDSSTLITEFDLVCENKVYSEASQSIYMAGLLVGALLFGPMADKYGRRFATLL 169

  Fly   212 CLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTS 276
            .|.......:..:.|.:.:.:...|.:||.||..:....|::..|..|...|:..|:::..|:..
Zfish   170 SLFLQFLSGVGVAFSPNIYVYIALRFVVGTTISGISINTFVLGTEWCGSAKRALFTILSHCFFAI 234

  Fly   277 GIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGR 341
            |:||||||.|..|:|..|..:.|.|...:|:|.:::|||.||||.:|:|:.|.:.:.:.|::|||
Zfish   235 GLMLLSGVAYGIRNWRVLQLVLSAPVGLFFIYYWILPESARWLLTQGKLDSAKREILKAARINGR 299

  Fly   342 EFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYG 406
            :..|.:..|:||:          ....:..:.||.|...:|.:.:::...||....||.|:|...
Zfish   300 KVSENLLDKMEAE----------NTAKSSTMIDLFRVGYLRKRALIMCYMWFVTSLVYYGVSLNV 354

  Fly   407 PALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLV 471
            ...|.:.|::..:..:.|.|:.|.|:..:..:|||...|:.::|||.||:|...:|........|
Zfish   355 GNFGLDIYLTQLIFGMAEFPARLSCFPLIQRFGRRICQSVVLLLGGTACLIIPAIPAKYPIVVTV 419

  Fly   472 LYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIM 536
            :.::.|..|:|||.|:|.:..|||||.||..|:|.:|....:..|..|.|..|...:..:|::|.
Zfish   420 IAVIGKFSLAASFSIVYVYTAELYPTVVRQNGVGLNSMCARVAGILAPLIGLLDVYHHAIPMIIY 484

  Fly   537 GFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCCRCAQKPEILSQPASYENLDVLAG 601
            |.|..:||.....|||||:..|                                  .::.|:.|.
Zfish   485 GSLPFVGGALTFLLPETLNTDL----------------------------------QDHTDIPAD 515

  Fly   602 SSTNASEVELELRDSRR 618
            .|...:||:||....||
Zfish   516 ESMTVTEVKLERWGRRR 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 158/534 (30%)
MFS 182..551 CDD:119392 111/368 (30%)
slc22a13bXP_017209322.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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