DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and oatx

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:XP_017208528.1 Gene:oatx / 555218 ZFINID:ZDB-GENE-070115-1 Length:567 Species:Danio rerio


Alignment Length:561 Identity:175/561 - (31%)
Similarity:271/561 - (48%) Gaps:56/561 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPLEQRKSL-- 100
            |||..:|.||::|.:.|..:.:|..:.......|. |.|..|:.: ||||.:.....:...:|  
Zfish     5 DLLDEVGGFGRFQMIHVTLLSIPGLLMASQNLLNN-FTAGVPEHH-CRIPNVTTAMNDSTTTLLR 67

  Fly   101 -SIPKELDNDELVYSKCYTY-GVNW---TQLLESGEEDDLTTMEPNASWPLIKCPQGWEYNTSVV 160
             .||  ||: .|..|||..| ...|   |..|..|...:|.|.         .|..||.|:.|..
Zfish    68 AFIP--LDS-SLTLSKCSRYKDTQWHLITDKLSHGNATELQTE---------GCADGWTYDKSEF 120

  Fly   161 WSSIVIDFDLVC--------DQDIYPTIGLAALNTGGPV-GVYLFGLLNDRGGRRL----SYFVC 212
            .||||.::||||        .|.||         .||.: |..:||.|:||.||:.    |||  
Zfish   121 ISSIVSEWDLVCTLRPLKQMSQTIY---------MGGVLTGAIIFGGLSDRFGRKALLIWSYF-- 174

  Fly   213 LATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSG 277
             ...|.|| .|:|:..:..:...|.:.|:::..|......:.:|.:....|:.|..::..|:|.|
Zfish   175 -QLALLGS-FTALAPSYVVYCIFRFLTGMSVSGVILNAVSLKVEWIPTKTRTLVGTLSSFFFTFG 237

  Fly   278 IMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGR- 341
            .|:|:||.|..|||.::.....|||:.:|:|.:...||.|||::.||.|||||:|.|:||:||: 
Zfish   238 QMVLAGVAYSLRDWRKIQMAVCLPFFIFFMYSWWFSESARWLVLNGRSEEALKLLHRVAKINGKP 302

  Fly   342 EFPEAVHL-KLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYY 405
            |..|.:.| :||:.::::  .:..|.:..|  .||.|||.||..::.:.:.||:....|.||:..
Zfish   303 EMTEKITLEELESHMQKE--VQSSKSIYTV--FDLLRTPTMRKISMCLMVVWFSTSFAYYGLAMD 363

  Fly   406 GPALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETL 470
            ....|.|.|:...:...|:.|:.|.....:...|||......:::........:.:|:|......
Zfish   364 LQKFGVNIYLMQVIFGAVDFPAKLVALLMLSFLGRRLTQGACLLVSASIIFANIFVPEDMQVTRT 428

  Fly   471 VLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVI 535
            .|.::.|...||||..:|.|.||||||.:|..|:|..|.:..:|.:..|.:..|......||.::
Zfish   429 ALAVLGKGFTSASFTCVYLFTGELYPTVIRQTGMGFVSTMSRIGSMAAPAVLILDDILPALPSIV 493

  Fly   536 MGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKD 576
            .|..:::.|:....|||||:..||.||::.||   .|:.|:
Zfish   494 YGGSAVIAGLIAFLLPETLNIPLPDTIDDVEE---KWEKKN 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 166/538 (31%)
MFS 182..551 CDD:119392 113/375 (30%)
oatxXP_017208528.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.020

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