DRSC/TRiP Functional Genomics Resources

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Protein Alignment CarT and CG4459

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster


Alignment Length:672 Identity:141/672 - (20%)
Similarity:253/672 - (37%) Gaps:145/672 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ESQPSVDEAFDLDDLLPTIGEFGKYQK---LLVFGICLPACIPCGFCAFNQLFMADTPDDYWCRI 86
            :|.|.:|....::      |.||::|.   ||:| :|.   ||..:.....::.|..|   |  .
  Fly    13 KSSPELDVVEQVN------GSFGRWQLRTILLIF-LCK---IPSAWFTAIIIYTAPYP---W--K 62

  Fly    87 PELLDLPLEQRKSLSIPKELDNDELVYSK------------CYTY------------GVNW--TQ 125
            .||:..|.:...|.|..:.:|.:..::..            |..|            |..|  :|
  Fly    63 GELVCHPADWNVSRSQTEHVDRNHPLWQDARSTDRLFNVDVCNAYSNSLARGFVRSHGQEWNASQ 127

  Fly   126 LLESGEEDDLTTMEPNASWPLIKCPQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGP 190
            ..|.|.:..|            .| :..|:.|.  :.|::..|||:|.:.:...:..:....|..
  Fly   128 SKEPGGQSSL------------PC-EHVEHRTD--YKSLISQFDLICSRRVLVALTQSFHALGAL 177

  Fly   191 V-GVYLFGLLNDRGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIIS 254
            : |:..:..|.....|||.....:..:..|:| |.|...:......|.:..:....:|.....|.
  Fly   178 IGGLMAYSALKKISPRRLMLLGMIGQIFCGNL-TGLVDTYQLHIYFRCLTSIFCALMYTSGQFIL 241

  Fly   255 LELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLERDWVRLSY----ITSLPFYAYFLYMFVMPES 315
            .::.....|..|..::..|::.|::||..::....:|   ||    |:|......:|:.:: .::
  Fly   242 NDITSGKARIIVVTLSELFWSMGLVLLPAISIYFDNW---SYLYVAISSSLIVLVWLHRWI-ADA 302

  Fly   316 PRWLLMRGRLEEALKILERMAKVNGREFPEAVHLKLEAQIRR-----DKLKKQKKKMANVGLADL 375
            |||||...|:|.||:.|...|..|.|:.|    |.|:.|:..     |:..|||.....|...: 
  Fly   303 PRWLLQHQRVEAALRQLLESATYNNRKVP----LTLDVQLTMYANDLDQKSKQKHSYCQVWDGE- 362

  Fly   376 CRTPNMRLKTILITLSWFANETVY---------LG---LSYYGPALGTNQYVSFFLSAVVELPSY 428
                ..|.:.:.|.|.|.....:|         ||   :.....|:|..:.|..|:...:.|   
  Fly   363 ----TKRSQLVYIHLIWGGAMVLYNIILLMIRNLGAQQVHVNTAAMGFAEMVGLFVGLYLIL--- 420

  Fly   429 LCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDD-----AVDETLVLYLVSKALLSASFLIIY 488
                |....|  ||..:| ||:.|::..:..:||:.     .|...||.:|:.|...|||..::.
  Fly   421 ----YTRRHW--RWAGNL-MIIAGLSTYLIWLLPETERNSRRVGLELVFWLILKIANSASIAVLT 478

  Fly   489 PFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGMTGLRL--- 550
            ....|:...:.|.:.:.:......:.|:..||::.|...:..:|:.|:..:..:.|:...||   
  Fly   479 TCTSEIVSKEKRVVLMLSVISFSRVCLLFCPFLSCLTVIHHLVPITILATMGWIYGLALRRLNRY 543

  Fly   551 ------PETLHHRLPQTIEEGEEFGKNWQFKDCCRCAQKPEILSQPASYENLDVLAGSSTN---- 605
                  |:......|.|..........       ||:   .:.|..::|.| ::|:....|    
  Fly   544 YWNTEQPQISQVPTPNTYRRQSAIILR-------RCS---TVSSDCSAYSN-ELLSNFERNMAVS 597

  Fly   606 -----------ASEVELELRDS 616
                       :||:|:|:..|
  Fly   598 IADIWHINFHPSSEIEMEVEQS 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 125/581 (22%)
MFS 182..551 CDD:119392 88/404 (22%)
CG4459NP_650850.1 2A0119 26..536 CDD:273328 121/557 (22%)
MFS 164..540 CDD:119392 86/399 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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