DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and CG6231

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_001262734.1 Gene:CG6231 / 42339 FlyBaseID:FBgn0038720 Length:585 Species:Drosophila melanogaster


Alignment Length:659 Identity:175/659 - (26%)
Similarity:271/659 - (41%) Gaps:96/659 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 DLDDLLPTIGEFGKYQKLL--VFGICLPACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPLEQR 97
            |.|.:|...|:|.:||.::  :||.   ..|......|.|..::..| |:||...:|:::..   
  Fly     2 DFDQILAKCGDFNRYQFMILALFGF---INIIVSMHYFTQTVISFVP-DHWCYHDKLVNMTY--- 59

  Fly    98 KSLSIPKELDNDELVYSK-----CYTYGVNWTQLLESGEEDDLTTMEPNASWPLIKCPQGWEYNT 157
                  ||:..   :|::     |       |:|      ||:.......|   .|..:.|.||.
  Fly    60 ------KEIGE---IYAQFENPSC-------TRL------DDINGHNVTVS---SKACEKWIYNY 99

  Fly   158 SVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFVCLATLLAGSLM 222
            ...:.|:..:.:.|||......||.:....|..||...:|||:|:.||..:..:......||...
  Fly   100 DFGYRSMNTELNWVCDSAYKARIGQSLFFIGSVVGTLFYGLLSDKIGRVPALILSNFCGFAGDFS 164

  Fly   223 TSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSF-VTVMTCTFYTSGIMLLSGVTY 286
            |..:|...|:...|.|.||.....:.:.:||.||.:..:.|:. :.:....||..|::....:..
  Fly   165 TIFTKSVATFTLCRFISGLAADTNFYLMYIIVLEYIRPSMRTLGLNMAVGLFYCLGLVFTPWLAV 229

  Fly   287 LERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNG-----REFPEA 346
            |...|......||||.....||.||:.||.:||:.|..::.|:..|:|:||.||     .:|.| 
  Fly   230 LVGHWQIYLACTSLPILLVVLYYFVVQESAQWLVTRNDIDGAIVRLKRVAKFNGCRVSQADFDE- 293

  Fly   347 VHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPALGT 411
              .:...|:..:.|....||.|.  |.|:.|||.||..|:::..........|..:|.....:|.
  Fly   294 --FRRHCQMTHEMLGGDDKKQAT--LLDMFRTPRMRKNTLILFFKSMVITLCYDAVSRNVEGMGI 354

  Fly   412 NQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGV---ACVITVMLPDDAVDETLVLY 473
            :.::.|.|||:..|||.:......|..||:...|.|:::||:   |..|.:.......:..|:..
  Fly   355 SPFIMFSLSALAVLPSSVLLVLLQDRIGRKGMASGSLLVGGLFTAAAGIAIAYQQHNHNAILLAC 419

  Fly   474 LVSKALLSASFLIIY----PFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLV 534
            |...|....:  |.|    .:|.||.||.|||.|:.|....|.......|:|.:||......|.:
  Fly   420 LTIAARFGVA--ISYESGSQYATELIPTCVRGQGVAAVHVAGFAASFLAPYILWLGTFFKAAPSI 482

  Fly   535 IMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGKNWQFKDCCRCAQKPEILSQPASYENLDVL 599
            |:|.|...|....|.|||||:..||.||||||.|||..:..|.            |..:...|  
  Fly   483 ILGVLFFAGSFVCLLLPETLNRSLPTTIEEGEVFGKGERMFDF------------PCLHNKHD-- 533

  Fly   600 AGSSTNASEVELELRDSRRVREPAPRID-ERTPLDTTASGSGRPVHRPSMKRLVRQMSVMDTQRT 663
                ...||.|||     :.:.....|| ::..:::.::|.             |:.|::|....
  Fly   534 ----DEESESELE-----KYKRKHSLIDAKQMQMESCSNGK-------------RKQSLIDADHE 576

  Fly   664 HDGTMQLTH 672
            ........|
  Fly   577 EQALKDANH 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 148/536 (28%)
MFS 182..551 CDD:119392 108/381 (28%)
CG6231NP_001262734.1 2A0119 11..509 CDD:273328 148/536 (28%)
MFS 125..499 CDD:119392 108/380 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 100 1.000 Domainoid score I351
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I321
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
55.060

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