DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CarT and CG8925

DIOPT Version :9

Sequence 1:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster
Sequence 2:NP_650526.1 Gene:CG8925 / 41963 FlyBaseID:FBgn0038404 Length:670 Species:Drosophila melanogaster


Alignment Length:512 Identity:144/512 - (28%)
Similarity:229/512 - (44%) Gaps:56/512 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 CGFCAFNQLFMADTPDDYWCRIPE-LLDLPLEQRKSLSIPKELDNDELVYSKCYTYGVNWTQLLE 128
            |.|..|..:|.. .|.|:||..|| |:.:.:.:.:::|   :..|.      |....|::||:  
  Fly   175 CTFHIFVYVFQI-APKDFWCARPENLMQMSVSEWRNIS---QSSNG------CLLLDVDYTQV-- 227

  Fly   129 SGEEDDLTTMEPN--ASWPL----IKCPQGWEYNTSVVWSS---IVIDFDLVCDQDIYPTIGLAA 184
                    |.|.|  .:||.    :...|.|.:..|.|..|   :|.:|||||.:||...:....
  Fly   228 --------TYENNQLINWPENATDLGYRQCWHFEFSDVDGSAKTLVQEFDLVCGRDILSLVETCF 284

  Fly   185 LNTGGPVGVYLFGLLNDRGGRR--LSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVY 247
            | .|...|..|.|.::||.|||  |..||.:.::..|.|..|.|...  :...|||:|.....|.
  Fly   285 L-VGAAAGAVLSGWISDRFGRRHTLMAFVTIQSVFGGILAFSTSVAM--FMSLRVIIGFASMTVT 346

  Fly   248 QIPFIISLELVGENYRSFVTVMTCTFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVM 312
            .:.|::.:|||...:|:.:.::.........:|.:|:.||.|||..|....|.|:.......|.:
  Fly   347 VVSFVLVVELVSGKWRTVIGILNILPVAISYVLSAGLAYLIRDWRHLQLAISWPWLIMLSIWFWL 411

  Fly   313 PESPRWLLMRGRLEEALKILERMAKVNG--REFPEAVHLKLEAQIRR------DKLKKQKKKMAN 369
            ||||||||.:|||:|...::||.|::||  ...|......|||.:.|      :.....:.|...
  Fly   412 PESPRWLLAQGRLDELCGLIERAARMNGTSASLPSNYRKTLEAAVPRAVQSPPEATTSVESKAVE 476

  Fly   370 VGLADLCRTPNMR----------LKTILITL-SWFANETVYLGLSYYGPALGTNQYVSFFLSAVV 423
            ....|...:.::.          .:|..:|| .|.....:|.||:.:...||.|.|::..::..|
  Fly   477 ADAPDPSASGHVNPLLVVFSAKYWRTTCLTLVIWLTLIIIYFGLTLHLSNLGGNIYINSAVAGTV 541

  Fly   424 ELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAVDETLVLYLVSKALLSASFLIIY 488
            |..|.......:...|.|..|...|:|.|:.|:.|.::.:..  ..:.|..::|.|:.|:..||.
  Fly   542 EAISICISILVVLKVGIRRSLIGYMLLPGLCCLATNLVSNQT--GVIALATIAKCLIGANNAIIP 604

  Fly   489 PFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGM 545
            .:....|||.||..|:|..:...|:.||.:||:..|...:..|||.:||...::|.:
  Fly   605 TYTAMQYPTIVRNFGVGMGNLASGIALILVPFLWKLEHIDPLLPLNVMGVCGLIGAV 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CarTNP_610052.1 2A0119 44..561 CDD:273328 144/512 (28%)
MFS 182..551 CDD:119392 109/385 (28%)
CG8925NP_650526.1 MFS 277..667 CDD:119392 109/390 (28%)
MFS_1 277..635 CDD:284993 100/362 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 100 1.000 Domainoid score I351
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I321
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
66.060

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